Pairwise Alignments

Query, 377 a.a., ornithine decarboxylase from Agrobacterium fabrum C58

Subject, 391 a.a., ornithine decarboxylase (RefSeq) from Shewanella sp. ANA-3

 Score =  374 bits (959), Expect = e-108
 Identities = 186/378 (49%), Positives = 257/378 (67%), Gaps = 5/378 (1%)

Query: 2   TTARILDFIKTRRPEGPCLVVDLDVVRDNFNAFRHSLPNSAIYYAVKANPAPEILKLLAS 61
           T  RI +F K +    P +V+D  ++   ++   +S P + +YYAVKANPA EIL LL +
Sbjct: 17  TFKRIEEFAKDKAT--PFVVIDTSIIAKQYDDMVNSFPYADVYYAVKANPAAEILTLLKN 74

Query: 62  LGSNFDCASVAEIQMALDAGATSDRISFGNTIKKERDVARAHALGIDLFAVDSHEEVEKV 121
            GSNFD AS+ E+ M  + G T DR+S+GNTIKK +DV   +  G+ ++A DS  ++  +
Sbjct: 75  KGSNFDIASIYELDMVTNVGVTPDRVSYGNTIKKRQDVRAFYERGVRMYASDSEADLRMI 134

Query: 122 ARAAPGARVFCRVLTDG-EGAEWPLSRKFGCVPQMAVDVLVYAHQMGLESYGVSFHVGSQ 180
           A  APG+R++ R+LT+G + A+WPLSRKFGC  +MA ++LV A+++GLE +G+SFHVGSQ
Sbjct: 135 AEEAPGSRIYVRILTEGTDTADWPLSRKFGCQNEMAYELLVLANELGLEPFGISFHVGSQ 194

Query: 181 MMNLDAWDAALADAKRVFASLA-KQGIHLQMVNMGGGFPTKYLRDVPAAEEYGQAIDTAL 239
             ++ AWD+A+   K +F  L  +  I L+M+NMGGGFP  Y+        Y + I   L
Sbjct: 195 QRDIGAWDSAIGKVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYAEQITHFL 254

Query: 240 RKHFGNQIPKTIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMD 299
           ++ FG+ +P+ I+EPGR ++ NAGV+ +EVVL+SKKS     RWVF D+GKF GL ETMD
Sbjct: 255 KEDFGDDLPQIILEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFSGLIETMD 314

Query: 300 EAIRYPIRTERDQDEMQPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGTGAYTT 359
           EAI++PI T + Q E+  CV+AGPTCDSAD++YE   Y LP  L IGD +     GAYTT
Sbjct: 315 EAIKFPIFTHK-QGELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTT 373

Query: 360 TYSAVAFNGFEPLKAYVI 377
           TYSAV FNGF PLK Y +
Sbjct: 374 TYSAVCFNGFPPLKDYYL 391