Pairwise Alignments

Query, 377 a.a., ornithine decarboxylase from Agrobacterium fabrum C58

Subject, 414 a.a., diaminopimelate decarboxylase (RefSeq) from Shewanella sp. ANA-3

 Score =  116 bits (290), Expect = 1e-30
 Identities = 101/357 (28%), Positives = 162/357 (45%), Gaps = 31/357 (8%)

Query: 18  PCLVVDLDVVRDNFNAFRHSLPNSA--IYYAVKANPAPEILKLLASLGSNFDCASVAEIQ 75
           P  +     +  +++AF +++ +    + YAVKAN    +L +LA LGS FD  S  E+ 
Sbjct: 28  PLYIYSRATLERHWHAFNNAVADHPHLVCYAVKANSNLAVLNVLARLGSGFDIVSGGELA 87

Query: 76  MALDAGATSDRISFGNTIKKERDVARAHALGIDLFAVDSHEEVEKV----ARAAPGARVF 131
             ++AG    ++ F    K   ++ +A  LGI  F V+S  E+E++     R    A V 
Sbjct: 88  RVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNDVAGRLGKVAPVS 147

Query: 132 CRVLTDGEGAEWPL------SRKFGCVPQMAVDVLVYAHQM-GLESYGVSFHVGSQMMN- 183
            RV  D +    P         KFG     A  V   AH +  L+  GV  H+GSQ+   
Sbjct: 148 LRVNPDVDAGTHPYISTGLKENKFGIAMDEAEVVFARAHALPHLQVKGVDCHIGSQLTEI 207

Query: 184 ---LDAWDAALADAKRVFASLAKQGIHLQMVNMGGGFPTKYLRDVPAAEEYGQAIDTALR 240
              LDA D  LA   R    LA QGI ++  ++GGG    Y  + P   +   A   AL 
Sbjct: 208 QPFLDAMDRMLALIDR----LADQGIVIEHFDVGGGLGVTYDDETPPHPDVYAA---ALL 260

Query: 241 KHFGNQIPKTIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMDE 300
              G++  K I EPGR +  NAG+   +V+ + + SD    R+  +D      +   +  
Sbjct: 261 ARLGDRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDK---RFAIVDGAMNDLIRPALYS 317

Query: 301 AIRYPIRTERDQDEMQPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGTGAY 357
           A +  I      ++ Q   + GP C++ D L +       +++  GD +++  +GAY
Sbjct: 318 AWQNIIPVNPRDEQAQVFDIVGPVCETGDFLGKDR----ALAIAAGDLLVVRSSGAY 370