Pairwise Alignments

Query, 228 a.a., outer membrane protein from Agrobacterium fabrum C58

Subject, 207 a.a., membrane protein from Herbaspirillum seropedicae SmR1

 Score =  137 bits (346), Expect = 1e-37
 Identities = 86/208 (41%), Positives = 122/208 (58%), Gaps = 11/208 (5%)

Query: 23  ALAADLAPLATAPTAEQAIAAASPWMLRVRGLGVIT-NDSGSVDGLPGAGL-SYSDTVIP 80
           A AA  A    AP   Q   A SPW++RVR + +   N S  ++G   + L + +   IP
Sbjct: 9   AAAAAFASSFAAPVFAQE--AQSPWLVRVRAVHLSPENKSDPINGQGASDLITINSKTIP 66

Query: 81  ELDISYFFTDNFAAELILGTTYAKINGEGVLAGTPVGKTWLLPPTLTLQYHFTDFGAFKP 140
           E+DISYFFT N AAEL+L  TY +   +  L G+ +G    LPP+L +QYHF    AF P
Sbjct: 67  EVDISYFFTKNIAAELVL--TYPQ-EQDVRLNGSKIGTFKHLPPSLLVQYHFMPDSAFSP 123

Query: 141 YIGAGVNYSLFYNQSEKPGFSNLDVKNKLGAAVQVGFDYMLDEHWGVNFDVKKIFLKTDW 200
           Y+GAG+NY+   + +   G   LD  +  G A+Q+G DY ++++W +NFD+KK+ + +D 
Sbjct: 124 YVGAGINYTRISSVNISGGL-QLD-NSSFGGALQIGADYKINKNWLINFDIKKVQISSD- 180

Query: 201 TAELGGTPISGKAKLDPWLIGAGITYRF 228
                G  IS   K+DPWLIG G+ YRF
Sbjct: 181 VKTAAGAKIS-SVKIDPWLIGVGVGYRF 207