Pairwise Alignments

Query, 228 a.a., outer membrane protein from Agrobacterium fabrum C58

Subject, 274 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score = 45.8 bits (107), Expect = 8e-10
 Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 53/212 (25%)

Query: 68  PGAGLSYSDTVIPELDISYFFTDNFAAELILGTTYA-KINGEGVLA-------------- 112
           PG  LS +      L  S++ TD+ A   + G     KI G G +               
Sbjct: 65  PGTSLSTNSANTVGLVFSHYLTDHIAVTTVAGVPPVFKIYGHGTIKPPGPAGALGQQDLG 124

Query: 113 ---GTPVGKT---WLLPPTLTLQYHFTDFGA-FKPYIGAGVNYSLF--------YNQSE- 156
                P+ K+   W   P L  QY+F    A F+P++G GV+Y+ F        + QS  
Sbjct: 125 DPQANPIVKSVRQW--SPALLFQYYFNAPTAHFRPFVGVGVSYNWFSDVQLGQNFVQSTQ 182

Query: 157 ------------KPGFSNLDVK--NKLGAAVQVGFDYMLDEHWGVNFDVKKIFLKTDWTA 202
                       KPG + +  K  +        G  Y + +HWG+   V  I LKT  + 
Sbjct: 183 NNLGAVLAAGAGKPGQTQVSAKASSSWAPVFNAGLAYNITDHWGLVASVTYIPLKTTSSV 242

Query: 203 EL---GGTPI---SGKAKLDPWLIGAGITYRF 228
            +    GT +     + K DP +    ++Y+F
Sbjct: 243 IIKAADGTELGVSKAELKADPIISFLAVSYKF 274