Pairwise Alignments

Query, 228 a.a., outer membrane protein from Agrobacterium fabrum C58

Subject, 218 a.a., outer membrane protein W (RefSeq) from Shewanella sp. ANA-3

 Score = 87.4 bits (215), Expect = 2e-22
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 9/215 (4%)

Query: 20  VNGALAADLAPLATAPTAEQAIAAASPWMLRVRGLGVITNDSGSVDGLPGAGLSYSDTVI 79
           V+  +AA L  LA   +A  +   A   ++R   + V  N+S S + L     S  +   
Sbjct: 7   VSTLIAATL--LAAGFSASVSAHQAGDIIVRAGAVTVAPNES-SANVLTLGEFSVDNDTQ 63

Query: 80  PELDISYFFTDNFAAELILGTTYAKINGEGVLAGTPVGKTWLLPPTLTLQYHFTDFGA-F 138
             L+  Y  TDNF  EL+  T ++            + +T  LPPTL  QY+F D  +  
Sbjct: 64  LGLNFGYMLTDNFGIELLAATPFSHSVSLPAPGVGEIAETKQLPPTLVAQYYFGDAQSKL 123

Query: 139 KPYIGAGVNYSLFYNQS-----EKPGFSNLDVKNKLGAAVQVGFDYMLDEHWGVNFDVKK 193
           +PY+G GVNY+ F++       +  G SNL +    G A QVG DY ++++W VN  V  
Sbjct: 124 RPYVGVGVNYTNFFDNDFNAHGKSLGLSNLSMSTSWGLAAQVGLDYQVNKNWLVNASVWY 183

Query: 194 IFLKTDWTAELGGTPISGKAKLDPWLIGAGITYRF 228
             + TD     G         ++PW+    + Y F
Sbjct: 184 AQISTDVKFTAGTDQYVFDTDINPWVYMVSVGYTF 218