Pairwise Alignments

Query, 400 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 399 a.a., GTP-binding protein from Escherichia coli Nissle 1917

 Score =  118 bits (296), Expect = 3e-31
 Identities = 105/372 (28%), Positives = 178/372 (47%), Gaps = 31/372 (8%)

Query: 1   MKKLPVTVLSGFLGAGKTTLLNHIL--ANRDGLRVALIVNDMSEINIDAALVRDGGANLS 58
           M ++PV +++GFLGAGKTTL+ ++L  ANR+ L V++IVNDMS++++D  L+ +    ++
Sbjct: 1   MNRIPVIIINGFLGAGKTTLMKNLLTQANRNHLAVSVIVNDMSDLDVDGVLIANTEI-VN 59

Query: 59  RTEEQLVEMTNGCICCTLRDDLLTEVRALAEQGRF---DYLLIESTGIAEPLPVAATFDF 115
                 V +T+  I  + +  + T  +A+    R    D + +E++G + PLP+      
Sbjct: 60  IANNNFVSITSDSI--SSQSGIKTVDKAIKNMLRHYLPDVIFVETSGGSHPLPLIKYLQT 117

Query: 116 RDENGRSLSDVAQLDTMVTVVDAANLLNDYGSSDFLADRGETAGDGDNRTIVDLLVEQIE 175
            +          QL +++++VD   L +DY     L    +       R I +LL EQI 
Sbjct: 118 HER--------LQLKSLLSLVDTVMLNDDYNGGKALIPAFQENLFHGKRRIENLLAEQIM 169

Query: 176 FADVVVLNKIGTATPEERDAARKIIVGLNPDAKLIEADFGKVELKEVLGTGRFDFARAEE 235
           F   ++L K    + +      K I  LNP   +I   +G ++L E+L    +DF R   
Sbjct: 170 FCSTLLLTKKDRLSFDIVTDVAKAIHPLNPYVNVIAVSWGNLKLAELLTLPDYDFNRV-- 227

Query: 236 HPLWFKELHG---FKDHIPETEEYGIRSFVYRAKKPFDPV-LFQRFIDRAWPGVVRAKGF 291
             L  +EL      ++     +   I S V +  +PF P  L++ +      G+ R+KGF
Sbjct: 228 -GLLIRELEDTITVEEAKISAQNGEIISRVIKDDRPFHPQRLWETYHYFMGMGIYRSKGF 286

Query: 292 FWLATRPRYVGEISQAGALVRTGKMGLWWSAV---PREQWPREKQFLDMMEPYLDPT--- 345
           FWL  RP      +QA   +    +  W S V   P      E++   +++  ++ T   
Sbjct: 287 FWLPGRPDMALLWNQAAGSINLEFISYWNSGVLADPDNHLTHEER--SVLQKKVNKTMGR 344

Query: 346 FGDRRQEIVFIG 357
           FGDRR  +  IG
Sbjct: 345 FGDRRCHLTIIG 356