Pairwise Alignments

Query, 419 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 436 a.a., Probable Sn-glycerol-3-phosphate-binding lipoprotein UgpB from Mycobacterium tuberculosis H37Rv

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 12/307 (3%)

Query: 42  IVSKFEAANPGTKVEIISL--PWSEAFQKFATMVSAGDVPDVMEMPDTWLSLYANNGMLE 99
           ++ +F+   P   V++I     + E  QKF   +   DVPDV+ + D W   +A +G+L 
Sbjct: 56  LIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLT 115

Query: 100 SLEPYLAKWEYTKGLSERTLELGRDVKETAYMLPYGFYLRAMFYNKKLLAEAGVKE-PPK 158
           +L+    +          +L    +     Y +PY       +YNK    +AG+ +  P+
Sbjct: 116 ALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQ 175

Query: 159 TLEEFADASKKVAALPGKYGYCLRGGPGGLNGWVMFGASMAGSNEFFTKDGTSTFDSPGW 218
           +  EF +   ++  + G            L  W   G + A    +  K  T T   P  
Sbjct: 176 SWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDK-WTLTLTEPAT 234

Query: 219 VKGLTYVIDLYKNGLAPKDSVNWGFNEIVAGFYSGTCAFLDQDPDALIAIAQRMKPEDFG 278
           +    +    Y+N +  K       N+I   F +G  A       +L  I    +  DFG
Sbjct: 235 IAAGNF----YRNSIHGKGYAAVA-NDIANEFATGILASAVASTGSLAGITASAR-FDFG 288

Query: 279 VMSMPKGPDGKTFPTIGFAGWSIMS--ASANKDLSWKLVETLEGPEGNIEWNKKTGALPV 336
              +P GPD       G AG +I +  +   K  + K +  +  P     ++++TG LPV
Sbjct: 289 AAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPV 348

Query: 337 HKSAEKD 343
            KSA  D
Sbjct: 349 RKSAVDD 355