Pairwise Alignments

Query, 286 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 337 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  144 bits (364), Expect = 2e-39
 Identities = 97/285 (34%), Positives = 150/285 (52%), Gaps = 9/285 (3%)

Query: 2   PSRNR-IAYAFLAPYLLIFATFWVWPIISSFMLSFQN----TRINPWRFAPSMNWGRLVS 56
           PSR   + Y  L P + + A   V+P+  S  LSFQ     T   P +     N+ +L +
Sbjct: 47  PSRQHWLGYLLLLPAVALVALIIVYPLFVSLDLSFQKIGMATLSAPRKPFTLENYHKLFA 106

Query: 57  DPAFYNALYNTLIILVIQVPVMIALATVMAVLLNSPLLKVRPLYRFAFFAPVVVGEVAYA 116
            P F+N+ + T+ ++V+      A+    A+L+N+   K R L R     P  V EV   
Sbjct: 107 SPDFWNSCWVTIKLVVVVSAACFAVGLGTALLVNNRF-KGRTLARLFVALPWAVPEVIAV 165

Query: 117 AVFRLMFSADFGIINKLITSVGLSP--ISWFDNANAAMALVIIAVTWRWAGYNAIIILAG 174
            +F  +F + FG++N L   +G++   I+WF    AA  +V I + W+   + +I+ LAG
Sbjct: 166 VIFAWIFDSSFGLMNWLFIKLGITSQMINWFSEPTAAFWVVAITMIWKGYPFVSIMTLAG 225

Query: 175 LQSIPGDVYEAATLDKVSKRQQFFHITLPLLKPIILFCVVLSVIGTMQLFAEPFLITNRG 234
           LQSIP D Y AA +D  +  Q+F++IT+P+L P++    VL V+   + F+   ++T+ G
Sbjct: 226 LQSIPEDFYNAAKVDGANAFQRFWYITIPVLMPVLGVTSVLVVLWVFRDFSIIKVLTD-G 284

Query: 235 GPGGGTETLGLFLYRQGFTSLNFGYASAIAYTMAALAIAISLLNL 279
           GP   T+TL +  Y Q F   N GYASAI      L +  SLL L
Sbjct: 285 GPLKATQTLSIMTYDQAFGFFNMGYASAIGIVTLVLCVVASLLML 329