Pairwise Alignments

Query, 286 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 289 a.a., sugar ABC transporter permease from Rahnella sp. WP5

 Score =  129 bits (325), Expect = 6e-35
 Identities = 83/275 (30%), Positives = 141/275 (51%), Gaps = 18/275 (6%)

Query: 15  YLLIFATFWVWPIISSFMLSFQNTRINPWRF--APSMNWGR----LVSDPAFYNALYNTL 68
           YL     FW++P +   +LSF +     W+F  APS N  +    ++ +P F+ A+YN  
Sbjct: 17  YLGYSLVFWLYPFLWLAVLSFTD-----WKFIGAPSFNGVKNIIAVMQNPLFWTAMYNVF 71

Query: 69  IILVIQVPVMIALATVMAVLLNSPLLKVRPLYRFAFFAPVVVGEVAYAAVFRLMFSADFG 128
             L   +P+++  + + A  L   +   +     +F    V   VAY+ VF  +FS + G
Sbjct: 72  KFLAYYLPIVLVSSLLFAFGLRK-IKYGKAFVALSFLLANVSSGVAYSIVFSKLFS-ETG 129

Query: 129 IINKLITSVGLSPISWFDNANAAMALVIIAVTWRWAGYNAIIILAGLQSIPGDVYEAATL 188
            IN  +  +    + WF + + AM  + + +TW++ GY  +I  +GL +IP D+Y+AA L
Sbjct: 130 PINTFLMDMFGVNVPWFTHPDFAMLSIALIITWKFVGYYGLIFYSGLITIPKDIYDAADL 189

Query: 189 DKVSKRQQFFHITLPLLKPIILFCVVLSVIGTMQLFAEPFLITNRGGPGGGTETLGLFLY 248
           DK +   + +HITLPL+   I+  +VL++     +F EP+LIT  GGP   T T  + +Y
Sbjct: 190 DKTTGLGKIWHITLPLMNAQIVMVLVLAITVAFSIFTEPYLITG-GGPLKSTTTPMVVMY 248

Query: 249 RQGFTSLNFGYASAIAYTMAALAIAISLLNLWVGR 283
              F  +   +A+    TM+ +    S   +W+ R
Sbjct: 249 EAAFRQMQPSWAA----TMSIIVALFSFTLIWILR 279