Pairwise Alignments

Query, 286 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 315 a.a., binding protein dependent transport system permease from Phaeobacter inhibens DSM 17395

 Score =  131 bits (329), Expect = 2e-35
 Identities = 85/283 (30%), Positives = 144/283 (50%), Gaps = 9/283 (3%)

Query: 4   RNRIAYA---FLAPYLLIFATFWVWPIISSFMLSFQN-TRINPWRFAPSMNWGRLVSDPA 59
           RNR A A   FLAP ++ F  + ++PI+ SF LSF     +   +F    N+  L+ D A
Sbjct: 26  RNRQALAPWLFLAPGVIFFLFYVIFPILQSFNLSFYRWDGLGDPQFIGMENYRELMDDRA 85

Query: 60  FYNALYNTLIILVIQVPVMIALATVMAVLLNSPLLKVRPLYRFAFFAPVVVGEVAYAAVF 119
           F  +L+N L  L++ + + I     +A+ LN  +  +R LY+  FF P V+ +V    VF
Sbjct: 86  FEVSLWNNLKWLLLYL-LAIPAGLFIALFLNQTVTGIR-LYKSLFFFPFVISQVVVGLVF 143

Query: 120 RLMFSADFGIINKLITSVGLSPISWFDNANAAMALVIIAVTWRWAGYNAIIILAGLQSIP 179
              +   FG++N+++  VGL PI+   +       +IIA  W    Y  I+ L GL ++ 
Sbjct: 144 SWFYDPTFGLLNQVLAWVGLGPINVLGDPTLVTYGIIIAGLWPQTAYCMILYLTGLNAVD 203

Query: 180 GDVYEAATLDKVSKRQQFFHITLPLLKPIILFCVVLSVIGTMQLFAEPFLITNRGGPGGG 239
            +  EAA LD     +  +++ +P L+P      V+++IG ++ F    ++TN GGP G 
Sbjct: 204 PEQVEAARLDGAKGAKMLWYVIIPQLRPATFVAFVVTIIGALRSFDLISIMTN-GGPFGS 262

Query: 240 TETLGLFLYRQGFTSLNF--GYASAIAYTMAALAIAISLLNLW 280
           +  L  +++ +  +   F  GY +AIA  +  + +      LW
Sbjct: 263 SRVLSFYMFEKALSEYGFRMGYGAAIAVVLFLIMLCFIAYFLW 305