Pairwise Alignments

Query, 286 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 297 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  128 bits (321), Expect = 2e-34
 Identities = 78/269 (28%), Positives = 139/269 (51%), Gaps = 5/269 (1%)

Query: 8   AYAFLAPYLLIFATFWVWPIISSFMLSF--QNTRINPWRFAPSMNWGRLVSDPAFYNALY 65
           A+  L P L   A F  +P +++F+ SF        P +F    ++  L+ D  F  AL 
Sbjct: 16  AWLLLLPALAFIAAFTHYPAVNTFIHSFFLDGRGGAPAQFVGLEHYQYLLEDEVFRKALV 75

Query: 66  NTLIILVIQVPVMIALATVMAVLLNSPLLKVRPLYRFAFFAPVVVGEVAYAAVFRLMFSA 125
           N L+     +P+ I LA  MA L+N+ L   + + R  +F P V+  +A A ++   ++ 
Sbjct: 76  NNLLFASGTIPLSIGLAMTMAFLVNAGLAG-QSVLRLCYFVPTVLPMIAVANIWLFFYTP 134

Query: 126 DFGIINKLITSVGLSPISWFDNANAAMALVIIAVTWRWAGYNAIIILAGLQSIPGDVYEA 185
           ++G++ ++  ++GL+ ++W  + + A+  VI    W+ AG+  I  LA LQ IP  + EA
Sbjct: 135 EYGLLEQIRGALGLAGVNWLGSESTALPCVIAVAVWKDAGFFMIFYLAALQQIPPSLGEA 194

Query: 186 ATLDKVSKRQQFFHITLPLLKPIILFCVVLSVIGTMQLFAEPFLITNRGGPGGGTETLGL 245
           A L+  S+   +  + +PLL P  LF +V + I   ++    F++T +GGP   +  L  
Sbjct: 195 AMLEGASRLYYYRRVVIPLLMPTTLFVLVNATINAFRMVDHLFVLT-QGGPNNASSLLLY 253

Query: 246 FLYRQGFTSLNFGYASAIAYTMAA-LAIA 273
           ++Y   F   + GY +A+   +   LA+A
Sbjct: 254 YIYEVSFKYWDTGYGAALTMVLLGFLALA 282