Pairwise Alignments

Query, 286 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 288 a.a., ABC transporter for Xylitol, permease component 1 (from data) from Dinoroseobacter shibae DFL-12

 Score =  137 bits (345), Expect = 3e-37
 Identities = 82/280 (29%), Positives = 149/280 (53%), Gaps = 8/280 (2%)

Query: 6   RIAYAFLAPYLLIFATFWVWPIISSFMLS---FQNTRINPWRFAPSMNWGRLVSDPAFYN 62
           +  +AF+ P ++  A   + P++ +   S   +  T++    F    N+  +++D  F+ 
Sbjct: 8   KTVFAFIGPAVIGLALVGIAPLLYALWTSLHFYNLTKLRRVEFIGLENYWTVLTDEVFWQ 67

Query: 63  ALYNTLIILVIQVPVMIALATVMAVLLNSP-LLKVRPLYRFAFFAPVVVGEVAYAAVFRL 121
           A+  T  +L   +P+ IAL   +A++L+ P L  V+ L R +   P+         + ++
Sbjct: 68  AMGRTFFLLGTALPLQIALGLGIALVLHQPGLTLVKTLARLSLVLPMATTYAVVGLLGQV 127

Query: 122 MFSADFGIINKLITSVGLSPISWFDNANAAMALVIIAVTWRWAGYNAIIILAGLQSIPGD 181
           MF+  FG++N+L+   G + I+W  +   A A++I    W+W  + A+++LAGL  +PG+
Sbjct: 128 MFNQKFGVVNQLL---GGADINWIGDPENAFAMIIFWDVWQWTPFVALVLLAGLTMVPGE 184

Query: 182 VYEAATLDKVSKRQQFFHITLPLLKPIILFCVVLSVIGTMQLFAEPFLITNRGGPGGGTE 241
           V EAA L+  SK     ++ LP L P ++  ++L    T++LF   F +T RGGPG  TE
Sbjct: 185 VEEAARLETKSKWTVLRYVQLPFLLPGLVAVLILRTADTLKLFDMVFTLT-RGGPGSSTE 243

Query: 242 TLGLFLYRQGFTSLNFGYASAIAYTMAALAIAISLLNLWV 281
            + L + R GF   + G ASA A  +  + I ++ + + V
Sbjct: 244 FISLMIQRVGFRGFDQGLASAQAIILLIITIVLAQIYIRV 283