Pairwise Alignments

Query, 278 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 316 a.a., carbohydrate ABC transporter permease from Bifidobacterium breve UCC2003

 Score =  132 bits (333), Expect = 7e-36
 Identities = 87/274 (31%), Positives = 150/274 (54%), Gaps = 19/274 (6%)

Query: 19  LTPLAIIWLFPLWMMFVFSTMPDYGI-------FSPDIVLVPSTNFMENLSNLQADT--N 69
           L  + I +LFP++   + ST     +       F+  +  +P+     N S L   T  N
Sbjct: 47  LVLVLIYFLFPIYWAIIASTKTPAQMTGSNGMWFAVPLDQLPNA-IATNYSKLLGWTRGN 105

Query: 70  FLRAMFISITVAVIYTVLSVFLTSMAGWALARYRFAGRRVVIAIILGTITLPFAVVVIPQ 129
           F R +  S+  + +  ++   ++ MAG+A A++ F G+   I +I+  + +P A++ IPQ
Sbjct: 106 FWRWVLNSLIYSGVSALIGTIVSVMAGYATAKFNFRGKNAAIGVIMACMLMPAALLTIPQ 165

Query: 130 FIMVAREFKLANTWIALIVPPLFNSLGVLFMRQ-SFSMMPTELFDAARVEGVKEWQIFLR 188
           +  +     L NT +++I+P   +  G    R  + S +P EL +AAR++G  E +IF  
Sbjct: 166 Y-SIFHTLHLTNTMLSIIIPCCVSPFGFFLGRTYAQSSVPDELLEAARIDGASEARIFFT 224

Query: 189 IALPLARPTMAALSIILFLASWNNYLWPLLINSRPGMMTAPVALGTLIGLTKVSW----G 244
           I L L  P M  + + LF+A+WNN++ PL++ S   +   PV LG L G+  +S     G
Sbjct: 225 IVLRLLAPAMVTIFLFLFVATWNNFVLPLMMVSSDTL--KPVTLG-LYGMVSLSTFTDRG 281

Query: 245 GIMAGAVLLTAPILVVFVALQRHFIAGISAGAVK 278
            +M GA+L   P++V+F+ LQR++ +G++AGAVK
Sbjct: 282 ALMMGALLGVLPVIVLFLGLQRYWQSGLAAGAVK 315