Pairwise Alignments

Query, 303 a.a., 5-dehydro-4-deoxyglucarate dehydratase from Agrobacterium fabrum C58

Subject, 306 a.a., 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) from Herbaspirillum seropedicae SmR1

 Score =  306 bits (784), Expect = 4e-88
 Identities = 155/295 (52%), Positives = 199/295 (67%), Gaps = 1/295 (0%)

Query: 3   PEQIKTALGSGLLSFPVTHFDAEGRFAADSYREHVEWLAGYKAPVLFAAGGTGEFFSLKP 62
           P+ +K  L SGLLSFP+T FD +G F   +Y E +EWLA Y A  LFAAGGTGEFFSL P
Sbjct: 6   PQDLKQILSSGLLSFPLTDFDEQGDFRPKTYIERLEWLAPYGASALFAAGGTGEFFSLVP 65

Query: 63  DEIPTIVAAAKEVA-GETAIVSGCGYGTEIAVDIARSVEKVGADGILLLPHYLIDAPQEG 121
            E   I+  A +   G+  I++G G  T  A+  A+  E++GA GILL+PHYL +A Q+G
Sbjct: 66  GEYSDIIRTAVDTCRGKVPIIAGAGGSTRAAIAYAQEAERLGAHGILLMPHYLTEASQDG 125

Query: 122 LYAHIKKVCQSVGIGVMVYNRDNSVLQADTLARLCDECPNLVGFKDGTGDIGLVRQITAK 181
           + AH++ VC+SV  GV++YNR    L ADTL +L D CPNL+GFKDG G+I  +  I  K
Sbjct: 126 IAAHVEAVCKSVKFGVIIYNRAVCKLNADTLQKLADRCPNLIGFKDGIGEIEPMVHIRRK 185

Query: 182 MGDRLMYLGGMPTAELFAEAYLGAGFTTYSSAVFNFVPGLANEFYAALRAGERATCERIL 241
           +GDR  YLGG+PTAE++A AY   G   YSSAVFNF+P  A EFY A+   +  T  +++
Sbjct: 186 LGDRFTYLGGLPTAEVYAAAYKALGVPVYSSAVFNFIPKTAVEFYQAIAKEDHDTVGKLI 245

Query: 242 VDFFYPFMAIRNRAKGYAVSAVKAGVRLQGFNAGPVRAPLKDLTNEEIGMLEALI 296
            +FF P++AIRNR  GYAVS VKAG R+ G +AGPVR PL D T EE   L AL+
Sbjct: 246 DEFFLPYLAIRNRKAGYAVSIVKAGARIAGHDAGPVRTPLTDCTPEEHEELAALM 300