Pairwise Alignments

Query, 291 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 296 a.a., maltose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  115 bits (287), Expect = 2e-30
 Identities = 80/282 (28%), Positives = 145/282 (51%), Gaps = 19/282 (6%)

Query: 25  HTALIIASFAMLYPILWMISGSFRPQDELFGSSSLIPSAVDVGGY-IRGWTGLQVSFGQ- 82
           H AL +    +++P+L +++ SFR  +  F + SLIP    +  + +     +Q + G  
Sbjct: 17  HAALWVFLALIIFPLLMIVAISFREGN--FATGSLIPDRPSLEHWKLALGIAVQNADGSV 74

Query: 83  ---------FFWNSFFISVLATIGNVVGCSLTAFAFARLRFGGRNFWFALMLGTLMLPYH 133
                    + WNS  ++ + ++  V   + +A+AFAR+RF G+      M+   M P  
Sbjct: 75  TPPPFPVMTWLWNSVKVAGITSVLIVALSTTSAYAFARMRFKGKETILKAMMIFQMFPAV 134

Query: 134 VVLIPQYILFLEMGWVNTSLPL-----IVPKYLATDAFFIFLMVQFFRGIPRELDEAAVM 188
           + L+  Y LF ++G     L L     ++  YL   A  ++ +  +F  I R L+EAA +
Sbjct: 135 LALVALYALFDKLGQYIPFLGLNTHGGLIFSYLGGIALHVWTIKGYFETIDRSLEEAAAL 194

Query: 189 DGCSPFRIYWKIMLPLSMPVLATAAIFSFIWTWDDFFGPLIYLNDINTYTVQLGLRSFVD 248
           DG +P++ +  ++LPLS+P+LA   I SFI    +     + L+D+N+YT+ +G++ ++ 
Sbjct: 195 DGATPWQAFRLVLLPLSVPILAVVFILSFIGVVGEVPVASLLLSDVNSYTLAVGMQQYLY 254

Query: 249 STGSSDWTSLFAMSNLSLVPVFLFFLFFQRLLIEGIATTGMK 290
                 W    A + LS +P+ + FL  QR L+ G+   G+K
Sbjct: 255 PQNYL-WGDFAAAAVLSALPITIVFLLAQRWLVGGLTAGGVK 295