Pairwise Alignments

Query, 291 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

 Score =  111 bits (277), Expect = 2e-29
 Identities = 79/270 (29%), Positives = 124/270 (45%), Gaps = 13/270 (4%)

Query: 25  HTALIIASFAMLYPILWMISGSFRPQDELFGSSSLIPSAVD--VGGYIRGWTGL-----Q 77
           H  LI  +  ML P LW+I  S   Q     S  L  +  D     Y   W         
Sbjct: 9   HLILIAGALFMLVP-LWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGFAGN 67

Query: 78  VSFGQFFWNSFFISVLATIGNVVGCSLTAFAFARLRFGGRNFWFALMLGTLMLPYHVVLI 137
           V+      NS  + +   IG +V   + A+A    R    + WF L+  TL+LP  V +I
Sbjct: 68  VTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRII 127

Query: 138 PQYILFLEMGWVNTSLPLIVPKYLATDAFFIFLMVQFFRGIPRELDEAAVMDGCSPFRIY 197
           P Y +   +G +N+   L++P   +  A F F   QFF+ IP EL EAA +D   P R +
Sbjct: 128 PSYEVVSNLGMLNSYTGLVLPLIASATATFFFR--QFFKTIPDELLEAAQLDNAGPIRFF 185

Query: 198 WKIMLPLSMPVLATAAIFSFIWTWDDFFGPLIYLNDINTYTVQLGLRSF---VDSTGSSD 254
             I+ PLS  ++A   I  F+  W+ +  P++   D    T+ +G++     ++ T    
Sbjct: 186 IDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINETSLPR 245

Query: 255 WTSLFAMSNLSLVPVFLFFLFFQRLLIEGI 284
           +   FAM  L+++P  L  + FQR  ++G+
Sbjct: 246 YDYAFAMVILAMLPPVLVVVIFQRWFVKGL 275