Pairwise Alignments

Query, 357 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 353 a.a., ABC transporter, ATP binding protein from Phaeobacter inhibens DSM 17395

 Score =  376 bits (965), Expect = e-109
 Identities = 199/357 (55%), Positives = 259/357 (72%), Gaps = 7/357 (1%)

Query: 2   GVRLNNIAKSFGSFAAIRDVSMEIPTGSFAVFVGPSGCGKSTLLRMIAGLEETSGGRIAI 61
           GV L    K +G    I DV + I  G F VFVGPSGCGKSTLLRMIAGLEETS G I I
Sbjct: 3   GVTLAKAVKKYGDVQVIHDVDLSIDDGEFCVFVGPSGCGKSTLLRMIAGLEETSSGNIHI 62

Query: 62  DDRDVTAVEPAERGVAMVFQNYALYPHLSVFENMAFSLRLARRPKAEVNERVGEAARILQ 121
            DRDVT ++ A+RGVAMVFQ+YALYPH++V +NM F L++   PK ++ E+V EA+RIL+
Sbjct: 63  GDRDVTRLDAADRGVAMVFQSYALYPHMTVEDNMGFGLKMNGHPKEKIREKVAEASRILK 122

Query: 122 LEDHLHKKPSQLSGGQRQRVAIGRAIVRQPKVFLFDEPLSNLDAELRVQMRLELTRLHRK 181
           L+D+L +KP  LSGGQRQRVAIGRAIVR P+VFLFDEPLSNLDAELRV MR+E+ RLH++
Sbjct: 123 LDDYLKRKPKALSGGQRQRVAIGRAIVRGPEVFLFDEPLSNLDAELRVDMRVEIARLHKE 182

Query: 182 LGATMIYVTHDQVEAMTLADKIFVLKGGVVQQAGAPLTLYDDPDNRFVAGFIGSPAMNFL 241
           +GATMIYVTHDQVEAMTLADKI VL+ G V+Q G+P+ LY +PDNRFVAGFIGSP+MNFL
Sbjct: 183 IGATMIYVTHDQVEAMTLADKIVVLRAGRVEQVGSPMELYANPDNRFVAGFIGSPSMNFL 242

Query: 242 QAEIVEQRNGVVTLSLDGGQRHLEARLSQPVSVGQRVEIGVRPEHLTIAQEGALPVNVEV 301
           +  +  Q +GVV  +L+   R +   ++ P   G +V +G+RP+HL++    +  V +++
Sbjct: 243 EGTV--QGDGVVVPALE--NRRVATSVALPAD-GSKVLLGLRPQHLSVTAADSSLV-LDL 296

Query: 302 AEELGDVSYLYTRATSGKEIIVQRQGSRESLDGRSVLLSASPDHIMVFD-SDGKRLR 357
            E LG VSY Y    +G+++IV+ +G     +G +V L        +FD +  +RLR
Sbjct: 297 RERLGGVSYDYLSTPTGEKLIVETRGDEALPEGTAVALGFDDADAYIFDGATEQRLR 353