Pairwise Alignments

Query, 357 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 377 a.a., sugar ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  336 bits (861), Expect = 7e-97
 Identities = 177/358 (49%), Positives = 240/358 (67%), Gaps = 3/358 (0%)

Query: 3   VRLNNIAKSF-GSFAAIRDVSMEIPTGSFAVFVGPSGCGKSTLLRMIAGLEETSGGRIAI 61
           V +  + K++ G    +  ++++I  G F V VGPSGCGKSTLLRM+ GLEE SGG +AI
Sbjct: 4   VNIKQLRKTYDGRADVLAGLNLDIRDGEFCVLVGPSGCGKSTLLRMLCGLEEISGGELAI 63

Query: 62  DDRDVTAVEPAERGVAMVFQNYALYPHLSVFENMAFSLRLARRPKAEVNERVGEAARILQ 121
             + V  + PAERG+AMVFQ+YALYPH++V++NMAF L++A   K++++ R+  AA IL+
Sbjct: 64  GGQVVNHLPPAERGIAMVFQSYALYPHMNVYKNMAFGLKVAGNSKSDIDARIRHAAAILK 123

Query: 122 LEDHLHKKPSQLSGGQRQRVAIGRAIVRQPKVFLFDEPLSNLDAELRVQMRLELTRLHRK 181
           ++  L + P +LSGGQRQRVAIGRAIVRQP++FLFDEPLSNLDA LRVQ RLE+ +LHR+
Sbjct: 124 IDHLLQRLPRELSGGQRQRVAIGRAIVRQPRLFLFDEPLSNLDAALRVQTRLEIAKLHRQ 183

Query: 182 LGATMIYVTHDQVEAMTLADKIFVLKGGVVQQAGAPLTLYDDPDNRFVAGFIGSPAMNFL 241
           L AT++YVTHDQVEAMTL DKI V+  G +QQAG PL LY  P N FVAGFIGSP MNF 
Sbjct: 184 LAATIVYVTHDQVEAMTLGDKIVVMHEGRIQQAGTPLELYQQPQNLFVAGFIGSPKMNFF 243

Query: 242 QAEIVEQRNGVVTLSLDGGQRHLEARLSQPVSVGQRVEIGVRPEHLTIAQEGALPVN--V 299
           Q  +    +  V + + GG R L       V+ G  V +G+R E +        P++  V
Sbjct: 244 QGVVTRCDDSGVQVEIAGGLRLLADVDPLGVTPGAAVTLGLRAEQIREGLGDGQPLHGVV 303

Query: 300 EVAEELGDVSYLYTRATSGKEIIVQRQGSRESLDGRSVLLSASPDHIMVFDSDGKRLR 357
            + E LG+ ++LY     G +I+V+  G+R    G+ + LS       +FD+ G+ LR
Sbjct: 304 NLVEHLGEANFLYVTLDGGHDIVVRGDGNRNVDIGQPIALSVHSHAFHLFDAQGQALR 361