Pairwise Alignments

Query, 357 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 351 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  374 bits (959), Expect = e-108
 Identities = 205/360 (56%), Positives = 250/360 (69%), Gaps = 16/360 (4%)

Query: 2   GVRLNNIAKSFGSFAAIRDVSMEIPTGSFAVFVGPSGCGKSTLLRMIAGLEETSGGRIAI 61
           G+ L    K +G    +  V + I  G F VFVGPSGCGKSTLLRMIAGLEETS G I I
Sbjct: 3   GITLRGAVKRYGETQVVHGVDLSIADGEFCVFVGPSGCGKSTLLRMIAGLEETSEGSIHI 62

Query: 62  DDRDVTAVEPAERGVAMVFQNYALYPHLSVFENMAFSLRLARRPKAEVNERVGEAARILQ 121
             RDVT ++P+ERGVAMVFQ YALYPH++V ENM F L++   PKAE+  +V  A+ IL+
Sbjct: 63  GARDVTRLDPSERGVAMVFQTYALYPHMTVAENMGFGLKMNGVPKAEIKAKVAAASEILK 122

Query: 122 LEDHLHKKPSQLSGGQRQRVAIGRAIVRQPKVFLFDEPLSNLDAELRVQMRLELTRLHRK 181
           L+D+L +KP  LSGGQRQRVAIGRAIVR P+VFLFDEPLSNLDAELRV+MR+E+ RLH++
Sbjct: 123 LDDYLARKPKALSGGQRQRVAIGRAIVRGPEVFLFDEPLSNLDAELRVEMRVEIARLHKE 182

Query: 182 LGATMIYVTHDQVEAMTLADKIFVLKGGVVQQAGAPLTLYDDPDNRFVAGFIGSPAMNFL 241
           +GATMIYVTHDQVEAMTLADKI VL+ G V+Q GAPL LY DPDN FVAGFIGSPAMNFL
Sbjct: 183 IGATMIYVTHDQVEAMTLADKIVVLRAGRVEQVGAPLELYRDPDNVFVAGFIGSPAMNFL 242

Query: 242 QAEIVEQR---NGVVTLSLDGGQRHLEARLSQPVSVGQRVEIGVRPEHLTIAQEGALPVN 298
              I        G+  L + G      A  S PV+V      GVRP+H+ + + G     
Sbjct: 243 DGRIENDAVHLAGLPPLPVPGA-----AGRSGPVTV------GVRPQHIAL-EPGGDGYL 290

Query: 299 VEVAEELGDVSYLYTRATSGKEIIVQRQGSRESLDGRSVLLSASPDHIMVFDSD-GKRLR 357
           VE+ E LG VSYLY R   G  + V+        +G  V LS +PD +M+F+++ G+RLR
Sbjct: 291 VELTESLGGVSYLYLRGADGSRLTVEAGEEDPIAEGTPVGLSLAPDRVMLFEAETGQRLR 350