Pairwise Alignments

Query, 292 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 298 a.a., ABC transporter for Lactose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  129 bits (325), Expect = 6e-35
 Identities = 82/282 (29%), Positives = 144/282 (51%), Gaps = 13/282 (4%)

Query: 16  VTPFIVVFATFFLYPLIEMVRISFTDAPLIGEG---NWVGFANYTKLLSDRLFVTSLKNN 72
           V P + +   F +YP+   + +SF      G G    + GFAN  +L +D +F+ +L N 
Sbjct: 20  VAPALGLITLFMVYPIAWSLWMSFQS----GRGMTLKFAGFANIVRLWNDPVFIKALTNT 75

Query: 73  GYFVLLTVVPTTVIALTIALAVSRLSGVKQTIAMSLFFLPYVLPVSVVTEIWAWMLDLQF 132
             + ++ V    ++AL +A  ++    V + +  +  FLP V  +   + ++  M     
Sbjct: 76  MTYFVVQVPIMILLALILASLLNNPRLVGRGVFRTAIFLPCVSSLVAYSVLFKGMFATD- 134

Query: 133 GILQPVISLI--AGKPVAVFKNPYWVMPMVAVVTIWWTNGFNVLLFIAGLRNIPTELYEA 190
           GI+   +  I  A  P+    +P+W   +V +   W   G+N++ ++A L+NI   +YE 
Sbjct: 135 GIVNSTLQAIGLAASPIPWLTHPFWAKVLVILAITWRWTGYNMIFYLAALQNIDKSIYEV 194

Query: 191 ASLDGATTWQRFWRVTWPLLWPVTALVLTLQLILQLKIFDQIYLLS--GGGPFNSSFVLL 248
           A +DG   W R   +T PLL PV      +  I  L++FD++Y L+   GGP N++  L 
Sbjct: 195 ARIDGVPAWARLTHLTIPLLKPVILFTTVISTIGTLQLFDEVYNLTEGKGGPSNATLTLS 254

Query: 249 LKVYREAFQ-LNNGGYASAVSTVLFLLIVIVSILQFQLLRIR 289
           L +Y   F+ + N GYA+ VS V+ +L+ +++ +QF   R R
Sbjct: 255 LYIYNLTFRFMPNLGYAATVSYVIVVLVALLAFVQFFAARER 296