Pairwise Alignments

Query, 292 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 294 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  118 bits (296), Expect = 1e-31
 Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 20/291 (6%)

Query: 5   RRKKSLIALSMVTPFIVVFATFFLYPLIEMVRISFTDAPLIGEGNWVGFANYTKLLSDRL 64
           RR   + A  ++ P +        YPL++   +SFTDA L     WVG ANY     D++
Sbjct: 4   RRSTIIFAWVLLLPAVFYVTVIVAYPLVDTFVLSFTDASLKKTTKWVGTANY-----DKI 58

Query: 65  FVTSLKNNGYFVLLTVVPTTVIALTIALAVSRLSGVKQTIAMS-------LFFLPYVLPV 117
           F  +       V+L     T  ++TI + +     V    A+        L   P+++P+
Sbjct: 59  FNATFAE----VILRTFVWTAFSVTIKMIIGTFGAVMLNAAVPGRALFRVLTMPPWIVPM 114

Query: 118 SVVTEIWAWMLDLQFGILQPVIS---LIAGKPVAVFKNPYWVMPMVAVVTIWWTNGFNVL 174
           ++   +W WM + QFG++   +    L+ G PVA   +         V  +W       L
Sbjct: 115 AIGIFMWGWMYNGQFGMISGTLQNWGLVDG-PVAFLAHGSTAFWATIVTDVWIGVPLVTL 173

Query: 175 LFIAGLRNIPTELYEAASLDGATTWQRFWRVTWPLLWPVTALVLTLQLILQLKIFDQIYL 234
             +A ++ IP +LYEAA  DGA  + RF R+T PLL P    +  L LI     FD I++
Sbjct: 174 YMLASMQAIPQDLYEAAWTDGAGRFYRFRRITLPLLVPSMITMSMLSLIATFNSFDIIWI 233

Query: 235 LSGGGPFNSSFVLLLKVYREAFQLNNGGYASAVSTVLFLLIVIVSILQFQL 285
           L+ GGP   +  +++  YR A      G  +A + ++ + + I  I  F++
Sbjct: 234 LTQGGPNGDTTTMIIDTYRTAIGSKKYGEGAARAVLICIFLSIFCIAYFRV 284