Pairwise Alignments

Query, 292 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 310 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  127 bits (318), Expect = 4e-34
 Identities = 85/279 (30%), Positives = 139/279 (49%), Gaps = 9/279 (3%)

Query: 6   RKKSLIALSMVTPFIVVFATFFLYPLIEMVRISFTDAPLIGEGNWVGFANYTKLLSDRLF 65
           +  +++    + P  V    F  YPL   V + FTD  +  +G ++G  NY  L  D +F
Sbjct: 18  QNNNVLGFLFMLPAAVFLICFLTYPLGLGVWLGFTDTRIGRDGVFIGIENYEFLARDSVF 77

Query: 66  VTSLKNNGYFVLLTVVPTTVIALTIALAVSRLSGVKQTIAMSLFFLPYVLPVSVVTEIWA 125
             S+ N   +  +  +   V+ L +AL ++     K +   ++  LP+V+P  +    + 
Sbjct: 78  WLSVYNTLLYTFVASILKFVLGLWLALLLNENLPFK-SFFRAIVLLPWVVPTVLSALAFW 136

Query: 126 WMLDLQFGILQ---PVISLIAGKPVAVFKNPYWVMPMVAVVTIWWTNGFNVLLFIAGLRN 182
           W+ D QF I+      + +I G P+    +P      V    +W    F  +  +AGL+ 
Sbjct: 137 WIYDSQFSIISWSLMQLGIIDG-PINFLGDPNNARASVIAANVWRGIPFVAISLLAGLQT 195

Query: 183 IPTELYEAASLDGATTWQRFWRVTWPLLWPVTALVLTLQLILQLKIFDQIYLLSGGGPFN 242
           IP  L EAASLDGAT+WQRF  VT P+L P+ A+V+T  ++     F  IY+L+ GGP N
Sbjct: 196 IPASLQEAASLDGATSWQRFRYVTLPMLTPIIAVVMTFSVLFTFTDFQLIYVLTKGGPVN 255

Query: 243 SSFVLLLKVYREAF---QLNNGGYASAVSTVLFLLIVIV 278
           ++ ++    ++      QL  G  A AV+ + FLL  I+
Sbjct: 256 ATHLMATLSFQRGIPGGQLGEGA-AIAVAMIPFLLAAIM 293