Pairwise Alignments
Query, 594 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58
Subject, 421 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2
Score = 248 bits (633), Expect = 4e-70
Identities = 153/451 (33%), Positives = 236/451 (52%), Gaps = 41/451 (9%)
Query: 22 AIIEFDLSGKILTANESFCRAIGYELAEIVGRHHSLFVEPSVVSSPDYKAFWSKLASGQF 81
A+IEF GK+L ANE+F +GY ++ G H F P++V S +Y+ FW++L +GQF
Sbjct: 2 AVIEFSPDGKVLRANENFLGTMGYRADQLAGLSHRDFCTPALVGSAEYREFWNQLRAGQF 61
Query: 82 DQRQYKRIGKGGREVWIEASYNPVF-RRGRPVKVVKIATDITERKLRAAEDAGKIDALSR 140
++R G+ VW+EASYNP+ +GR VKVVK A D+T + AE G++ AL R
Sbjct: 62 VSGTFQRRSAQGQNVWLEASYNPIVDEQGRVVKVVKYALDVTAKVASEAETRGRLAALDR 121
Query: 141 AQAIIEFSPEGEVLTANDNFLAALGYSLSEVQGRHHSMFCDPAYTQSSEYKQFWQRLAGG 200
A A+IEF G +LTANDNF+ + Y+L+E++G+HH MFC+P+ SSEY FW+RL G
Sbjct: 122 AMAVIEFDLGGHILTANDNFMNVMNYTLAELKGKHHRMFCEPSLVGSSEYSDFWRRLNAG 181
Query: 201 DLVADEFMRLGKGGRKVFIQASYNPIFDMNGKVFKVVKFATDVTGRVENVETLAQCLNDL 260
+ + +F RLGK G+ V+++ASYNP++D GK+ K+VKFA+D++ RVE E
Sbjct: 182 EFFSGQFKRLGKNGKVVWLEASYNPVYDAEGKLCKIVKFASDISERVEKFE--------- 232
Query: 261 AEGDLAQSIDKPFIPSLERLRTDFNAASEKLKRAMTLVSENAGAISSGSNEIRSAADDLA 320
+ ++ + + S E R + + A I + E+R AD++
Sbjct: 233 ---EDSRGASRAYHISAETER---------------VAEQGAQVIHQTAKEMREIADNIG 274
Query: 321 KRTEQQAASIEETAAALEEITTAVNDSSRRADEAGKIVARARDHAEHSGQVVRDAISAMD 380
A + + A EEIT VN AD+ + A A +G R D
Sbjct: 275 ----SSARLVGQLGARSEEITAIVNTIRGIADQTNLLALNAAIEAARAGDQGRGFAVVAD 330
Query: 381 QIE----KSSREISNIIGVIDEIAFQTN--LLALNAGVEAARAGE--AGKGFAVVAQEVR 432
++ ++SR S I +I I +T + ++N E A G A + +V+ Q +R
Sbjct: 331 EVRQLAGRTSRSTSEIAEMIGMILSETRDAVASMNVTHEGALRGVTLADQAGSVIVQ-IR 389
Query: 433 ELAQRSATAAKEIKSLINASGAQVENGVGLV 463
+ A S ++ S + +G V
Sbjct: 390 NGTTDALEAVSMFASKLDESEVIPKTAIGWV 420
Score = 175 bits (444), Expect = 3e-48
Identities = 129/396 (32%), Positives = 184/396 (46%), Gaps = 62/396 (15%)
Query: 143 AIIEFSPEGEVLTANDNFLAALGYSLSEVQGRHHSMFCDPAYTQSSEYKQFWQRLAGGDL 202
A+IEFSP+G+VL AN+NFL +GY ++ G H FC PA S+EY++FW +L G
Sbjct: 2 AVIEFSPDGKVLRANENFLGTMGYRADQLAGLSHRDFCTPALVGSAEYREFWNQLRAGQF 61
Query: 203 VADEFMRLGKGGRKVFIQASYNPIFDMNGKVFKVVKFATDVTGRVENVETLAQCLNDLAE 262
V+ F R G+ V+++ASYNPI D G+V KVVK+A DVT +V + A+ LA
Sbjct: 62 VSGTFQRRSAQGQNVWLEASYNPIVDEQGRVVKVVKYALDVTAKVASE---AETRGRLAA 118
Query: 263 GDLAQSI------------DKPFIPSLERLRTDFNAASEKLKRAMTLVSE---------- 300
D A ++ + F+ + + ++ +LV
Sbjct: 119 LDRAMAVIEFDLGGHILTANDNFMNVMNYTLAELKGKHHRMFCEPSLVGSSEYSDFWRRL 178
Query: 301 NAGAISSGSNEIRS---------AADDLAKRTEQQAASIEETAAALEEITTAVNDSSRRA 351
NAG SG + A+ + E + I + A+ + E + SR A
Sbjct: 179 NAGEFFSGQFKRLGKNGKVVWLEASYNPVYDAEGKLCKIVKFASDISERVEKFEEDSRGA 238
Query: 352 DEAGKIVARARDHAEHSGQVVRDAISAMDQIEKS--------------SREISNIIGVID 397
A I A AE QV+ M +I + S EI+ I+ I
Sbjct: 239 SRAYHISAETERVAEQGAQVIHQTAKEMREIADNIGSSARLVGQLGARSEEITAIVNTIR 298
Query: 398 EIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSATAAKEIKSLI-------- 449
IA QTNLLALNA +EAARAG+ G+GFAVVA EVR+LA R++ + EI +I
Sbjct: 299 GIADQTNLLALNAAIEAARAGDQGRGFAVVADEVRQLAGRTSRSTSEIAEMIGMILSETR 358
Query: 450 ------NASGAQVENGVGLVTRAGSALQEIAEQVRD 479
N + GV L +AGS + +I D
Sbjct: 359 DAVASMNVTHEGALRGVTLADQAGSVIVQIRNGTTD 394
Score = 132 bits (332), Expect = 3e-35
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
Query: 14 LAALSKSQAIIEFDLSGKILTANESFCRAIGYELAEIVGRHHSLFVEPSVVSSPDYKAFW 73
LAAL ++ A+IEFDL G ILTAN++F + Y LAE+ G+HH +F EPS+V S +Y FW
Sbjct: 116 LAALDRAMAVIEFDLGGHILTANDNFMNVMNYTLAELKGKHHRMFCEPSLVGSSEYSDFW 175
Query: 74 SKLASGQFDQRQYKRIGKGGREVWIEASYNPVF-RRGRPVKVVKIATDITERKLRAAEDA 132
+L +G+F Q+KR+GK G+ VW+EASYNPV+ G+ K+VK A+DI+ER + ED+
Sbjct: 176 RRLNAGEFFSGQFKRLGKNGKVVWLEASYNPVYDAEGKLCKIVKFASDISERVEKFEEDS 235