Pairwise Alignments
Query, 594 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58
Subject, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056
Score = 224 bits (570), Expect = 7e-63
Identities = 136/411 (33%), Positives = 218/411 (53%), Gaps = 36/411 (8%)
Query: 13 VLAALSKSQAIIEFDLSGKILTANESFCRAIGYELAEIVGRHHSLFVEPSVVSSPDYKAF 72
+++AL ++ A IEFD GKIL AN F A+GY E++G+HH +F +P V+S +Y F
Sbjct: 28 IVSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHKIFCDPETVNSLEYAQF 87
Query: 73 WSKLASGQFDQRQYKRIGKGGREVWIEASYNPVFRR-GRPVKVVKIATDITERKLRAAED 131
W LA GQ ++ + R+ K G +WIEA+Y PV R G KV+K+A D+T+ K+ A +
Sbjct: 88 WKSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKVIKVAHDVTKAKITADKQ 147
Query: 132 AGKIDALSRAQAIIEFSPEGEVLTANDNFLAALGYSLSEVQGRHHSMFCDPAYTQSSEYK 191
A +L R+ A+I+F+P+G + AN+NFL A GY L E+ G+HH MFCD + + E
Sbjct: 148 AAVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGKHHRMFCDDRFYK--ENP 205
Query: 192 QFWQRLAGGDLVADEFMRLGKGGRKVFIQASYNPIFDMNGKVFKVVKFATDVTGRVENV- 250
FW+ LA G+ + F R + G+ ++++A+YNPIF+ G V +VVKFA+DVT +V
Sbjct: 206 NFWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVTQVVKFASDVTDQVLKAH 265
Query: 251 ----------ETLAQCLNDLAEG----DLAQSIDKPFIPSL---ERLRTDFNAASEKLKR 293
+T A+ + G D A +I S+ L TD ++ S+++ +
Sbjct: 266 ATKEASQMAQQTSAETVRVAESGREMIDAAATIASGITESIAGANALMTDLSSQSQRITQ 325
Query: 294 AMTLVSENAGAISSGSNEIRSAADDLAKRTEQQAASIEE----TAAALEEITTAVNDSSR 349
+T + N+I + LA +AA E A +E+ + +++S+
Sbjct: 326 IVTTI-----------NKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRSLASNTSQ 374
Query: 350 RADEAGKIVARARDHAEHSGQVVRDAISAMDQIEKSSREISNIIGVIDEIA 400
E IV R E SGQ + + + + ++ ++I I A
Sbjct: 375 ATSEIDNIVKRNSQLTEQSGQTMEQIQAKVTEFNHMLQQTQSLIEQIQHAA 425
Score = 154 bits (388), Expect = 9e-42
Identities = 126/425 (29%), Positives = 198/425 (46%), Gaps = 56/425 (13%)
Query: 131 DAGKIDALSRAQAIIEFSPEGEVLTANDNFLAALGYSLSEVQGRHHSMFCDPAYTQSSEY 190
D+ + AL R A IEF P+G++L AN FL+A+GY+ EV G+HH +FCDP S EY
Sbjct: 25 DSDIVSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHKIFCDPETVNSLEY 84
Query: 191 KQFWQRLAGGDLVADEFMRLGKGGRKVFIQASYNPIFDMNGKVFKVVKFATDVTGRVENV 250
QFW+ LA G F RL K G ++I+A+Y P+ + G V+KV+K A DVT
Sbjct: 85 AQFWKSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKVIKVAHDVTKAKITA 144
Query: 251 ETLAQCLNDL----------AEGDLAQSIDKPFIPSLERLRTDFNAASEKLKRAMTLVSE 300
+ A + L +G + ++ ++ F+ + + ++ E
Sbjct: 145 DKQAAVFHSLDRSSAMIQFNPDGTIKEA-NENFLKATGYRLEEIVGKHHRMFCDDRFYKE 203
Query: 301 N--------AGAISSGSNEIRSA-ADDLAKRTEQQAASIEETAAALEEITTAVNDSSRRA 351
N G SG R+ DL E I A + ++ +D + +
Sbjct: 204 NPNFWRELARGEFKSGLFHRRTRHGQDL--WLEATYNPIFNDAGVVTQVVKFASDVTDQV 261
Query: 352 DEAGKIVARARDHAEHSGQVVRDAISAMDQIEKSSREISNI------------------- 392
+A ++ + S + VR A S + I+ ++ S I
Sbjct: 262 LKAHATKEASQMAQQTSAETVRVAESGREMIDAAATIASGITESIAGANALMTDLSSQSQ 321
Query: 393 -----IGVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSATAAKEIKS 447
+ I++IA QTNLLALNA +EAARAGE G+GFAVVA EVR LA ++ A EI +
Sbjct: 322 RITQIVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRSLASNTSQATSEIDN 381
Query: 448 LINASGAQVENGVGLVTRAGSALQEIAEQVRDINTNVVAIVEAAREQSTALAEINQAV-- 505
++ + L ++G +++I +V + N +++ ++ EQ AE Q
Sbjct: 382 IVKRNSQ-------LTEQSGQTMEQIQAKVTEFN-HMLQQTQSLIEQIQHAAENVQKTVS 433
Query: 506 NTVDQ 510
N VD+
Sbjct: 434 NIVDE 438
Score = 94.7 bits (234), Expect = 7e-24
Identities = 48/118 (40%), Positives = 75/118 (63%), Gaps = 3/118 (2%)
Query: 12 AVLAALSKSQAIIEFDLSGKILTANESFCRAIGYELAEIVGRHHSLFVEPSVVSSPDYKA 71
AV +L +S A+I+F+ G I ANE+F +A GY L EIVG+HH +F + +
Sbjct: 149 AVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGKHHRMFCDDRFYK--ENPN 206
Query: 72 FWSKLASGQFDQRQYKRIGKGGREVWIEASYNPVFR-RGRPVKVVKIATDITERKLRA 128
FW +LA G+F + R + G+++W+EA+YNP+F G +VVK A+D+T++ L+A
Sbjct: 207 FWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVTQVVKFASDVTDQVLKA 264