Pairwise Alignments

Query, 303 a.a., spermidine/putrescine ABC transporter permease from Agrobacterium fabrum C58

Subject, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

 Score =  117 bits (294), Expect = 2e-31
 Identities = 78/270 (28%), Positives = 145/270 (53%), Gaps = 7/270 (2%)

Query: 30  IQATPLFLILGF---FLALPILMIAVVSFWDYDFAQMYPDFVTFNYLETLGSWVIWQTYL 86
           +Q   + LI+G+   F+ +P LMI   SF   D A +     TF     L   +  +  L
Sbjct: 8   LQNAIVTLIVGWLVLFVLIPNLMIIGTSFLTRDEANLIKFAFTFENYTRLLDPLYGKVML 67

Query: 87  NTLKYAAIVWAITLFCGFWVAYFLAFHIRTTTMQMVLFLVCTVPFLTSNIIRMISWIPVL 146
           ++   A +   I L  G+  AY +A  +       +LFL+  VPF T+++IR      VL
Sbjct: 68  HSFYMAIVATLICLVIGYPFAYIVA-KMPEKWRPFMLFLII-VPFWTNSLIRTYGLKIVL 125

Query: 147 GRNGLVNSALVGTGILPEPVEWLLYSDFAVVLAMVHLYTLFMVTPIFNTLMRIDKSLIEA 206
           G  G++N AL+  G++  P+  +++++ AV++ +V++   FM+ P+++ + ++D + IEA
Sbjct: 126 GTQGILNQALMSLGLIDAPLR-IMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTYIEA 184

Query: 207 ARDAGATGWQTLSNVIIPLAKPGMAIGSIFVVTLVMADFSTVQVMSGGQSASVALMMKNQ 266
           ARD GA  +QTL  VI+PL  PG+  G + V+   +  F    ++ G ++  +  ++K+Q
Sbjct: 185 ARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVIKSQ 244

Query: 267 -MSLLQYPAAAANAVILLILVLLMVAGILR 295
            ++   +P  AA ++ L + + +M+    R
Sbjct: 245 VLNARDWPFGAATSIALTLAMAIMLYAYYR 274