Pairwise Alignments

Query, 272 a.a., spermidine/putrescine ABC transporter permease from Agrobacterium fabrum C58

Subject, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (248), Expect = 4e-26
 Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 8/245 (3%)

Query: 16  FFVLFVLFLYGPLSAILILAFQGPNGGLTFPLNGVSLHWFGNLFEQQAVGDFGGSFRRSF 75
           F  L  LFLY P+  ++  +F     G+ +   G +  W+  L    ++         S 
Sbjct: 9   FMSLVYLFLYLPIIVLIANSFNENKFGIKW--GGFTTKWYHALMNNDSLMQAAW---HSI 63

Query: 76  GLGLMVMTVTVFVSLLAGLA-FRRKFIGATPLFYLSVASLVVPSIIISLGIGVLFQQLGL 134
            + +   T    +  L  +A FR +F G   +  +    ++ P I++++ +  LF  +G 
Sbjct: 64  NVAVFSATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGA 123

Query: 135 EPSWYTSAFGAHLTWTLPFGVLIMLAVFNRFSPSYEEAARDLGASSWQTFAHVVLPMIAP 194
           +  ++T    AH+T+ LPF V+ +    N F     EAA+DLGA  W     ++LP+  P
Sbjct: 124 KLGFFTLLI-AHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKP 182

Query: 195 SLIGVGLFGFTLSYDE-FARTLMTSGTYNTLPLEIYGMTTNVTTPVLYALGAVTTLFSLL 253
           ++    L  FTLS D+    + +T  TY  LPL+IY M     +P + AL  V  + SL+
Sbjct: 183 AVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLV 242

Query: 254 VIAAT 258
           ++ A+
Sbjct: 243 LVVAS 247