Pairwise Alignments

Query, 272 a.a., spermidine/putrescine ABC transporter permease from Agrobacterium fabrum C58

Subject, 278 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 21/250 (8%)

Query: 23  FLYGPLSAILILAFQGPNGGLTFPLNGVSLHWFGNLF-EQQAVGDFGGSFRRSFGLGLMV 81
           FLY P+  ++I +F      L     G S  W+G L  ++Q +G    SFR    + ++ 
Sbjct: 17  FLYVPILLLMIYSFN--ESRLVTVWAGFSAKWYGALLRDEQMLGAAWMSFR----IAVVN 70

Query: 82  MTVTVFVSLLAGLAFRR--KFIGATPLFYLSVASLVVPSIIISLGIGVLFQQLGLEPSW- 138
            ++   +  LA LA  R  +F G T    +  A LV+P +I  L   +LF  L     W 
Sbjct: 71  ASLATILGTLAALAMVRFGRFRGRTLFSGMLSAPLVMPEVITGLASLLLFVALEQLLGWP 130

Query: 139 ----YTSAFGAHLTWTLPFGVLIMLAVFNRFSPSYEEAARDLGASSWQTFAHVVLPMIAP 194
                T+   AH+T++  +  +++ +       S EEAA DLGA   + F  + +P+IAP
Sbjct: 131 QGRGMTTITIAHITFSTAYVAVVLQSRLQGMDRSIEEAAMDLGARPAKVFLLITIPVIAP 190

Query: 195 SLIGVGLFGFTLSYDEFARTLMTSG-TYNTLPLEIYGMTTNVTTPVLYALGAVTTLFSLL 253
           +L+   L  FTLS D+       SG   +TLP+ ++       +P + AL       ++L
Sbjct: 191 ALVAGWLLSFTLSLDDLVIASFVSGPASSTLPMVVFSSVRLGVSPEINALA------TIL 244

Query: 254 VIAATLGLIV 263
           V+ AT+ +++
Sbjct: 245 VLTATVAILI 254