Pairwise Alignments

Query, 180 a.a., RNA polymerase sigma factor from Agrobacterium fabrum C58

Subject, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

 Score = 73.9 bits (180), Expect = 1e-18
 Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 7/149 (4%)

Query: 27  AKLPRIMALATRMLGDPVEAEDVAQETFLRIWKHAGTWRQGAARFDTWIHRVALNLCYDR 86
           A LP +   A  + G    A+D+ Q    R    A  +  G  RFD WI R+  NL  D+
Sbjct: 14  AFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGT-RFDAWIFRILRNLWIDQ 72

Query: 87  LRKRREISVAQPSDLADARTSSENGGADIDEG----EAVGRALSLIPERQREAIILVYYQ 142
           +R+++   V    D+ +    + + G    E     + V  A++ +P+ QRE ++LV  +
Sbjct: 73  VRRQKTAGVQD--DITERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCVE 130

Query: 143 EMSNREAADIMHVSVDALESLLSRGRRAL 171
           E+S REAAD+M + +  + S L R RR+L
Sbjct: 131 ELSYREAADVMGIPIGTVMSRLMRARRSL 159