Pairwise Alignments

Query, 334 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 332 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  194 bits (494), Expect = 2e-54
 Identities = 126/330 (38%), Positives = 184/330 (55%), Gaps = 10/330 (3%)

Query: 1   MTVYTERAKGSP----LSDFFAENAQVLSIAAFFALCMVFFSVTTDTFLTAGNLLNVVRQ 56
           M +  +RA G      LS   A  A  + +A   A   +F S+ TD+F TA NL N+ R 
Sbjct: 1   MAITLDRAVGQRDRGWLSFLLASQAFWVLVAVILAC--LFLSIATDSFATAKNLYNITRN 58

Query: 57  AAPILIVSVAMTFVIITGGIDLSVGSMVALINAVGAILLAAGYPWPLVVVAMLVLGGGLG 116
              + I+++ MT VIITGGIDLSVGS++ L + V A+++ AGY   + + A +      G
Sbjct: 59  FTFVAIIALGMTLVIITGGIDLSVGSVLCLCSMVLAVVMHAGYGIEVGIAASIGTALVAG 118

Query: 117 LVQGWFIAYQGIPAFIVTLAGLSILRGVALYITQGYSVPI--PDAPGFFYLGRGD-FLGM 173
              G  IAY G P F++TL  LSI R +A+  +    V    PD      LG G  FLG+
Sbjct: 119 AFNGVMIAYLGFPPFVITLGMLSIARSLAMVASNNTVVFEFGPDHDTLLALGGGAWFLGI 178

Query: 174 PVPALIGVVVTVIAYIVLSSTRYGRRVVAVGSNPEAARRVGMPAKWILASVYLAAGVASA 233
             P L  +V+ ++   VL  T++GR V A+G N  AA   G+P + I  +VY+ + +A+ 
Sbjct: 179 ANPVLYMIVLALLTGFVLRWTKFGRYVFAIGGNEHAATLTGVPVRRIKVAVYMISALAAG 238

Query: 234 IAGLMIAARLGSGSSNAAVGFELQVVAAVVLGGTSLMGGRGTILGTVLGTMTIAVIGNGL 293
           IAG++    LG+ ++N   G ELQV+AA V+GG +L GG GT  G ++G   I VI N L
Sbjct: 239 IAGIIQTGWLGAVTTNIGAGMELQVIAAAVIGGANLAGGAGTASGALIGAALIEVIRNSL 298

Query: 294 ILMHISPFFT-QIVTGAIILAAIWLNTRIF 322
            L+ I+ F+    + GAI+LA ++   R F
Sbjct: 299 GLLGINAFWQGAFIGGAIVLAVLFDRIRNF 328