Pairwise Alignments

Query, 317 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 308 a.a., rhizopine-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 12/313 (3%)

Query: 5   KRRYFSAALAATVLAGATLSAGLVQAAEKTIALVQINQQALFFNQMNEGAEKAAKEA--G 62
           K R  S AL+  + +GA L       A+  I +        +   + E  +K AK    G
Sbjct: 4   KTRIASLALSLMLTSGAAL-------ADLKIGVSMSQFDDTWLTYLRESMDKKAKSLPDG 56

Query: 63  VKLVIFNANNDPAAQNSAIETYIQQKVDGIAVVAIDVNGIMPAVKQAAAANIPVVAIDAI 122
           V L   +A +D   Q S +E++I QKVD + V  +D        K A AA IP+V ++  
Sbjct: 57  VTLQFEDARSDVVKQLSQVESFISQKVDALIVNPVDTAATQRITKAAVAAGIPLVYVNR- 115

Query: 123 LPEGPQKAQIGVDNGKAGADMGKFFLDYVKSDMGGKAKIGV-VGALNSFIQNIRQKGFED 181
            P+ P+  +  V       + G+  + Y+   MGGK  I + +G L +     R KG +D
Sbjct: 116 RPDDPKLPEGVVTVASDDLEAGRMQMQYLAEKMGGKGNIVILLGDLANNSTANRTKGVKD 175

Query: 182 TIKDKTGITTAGVVDGQNVQDTALSAAENLITGNPDMTAIYATGEPALLGAVAAVESQSK 241
            +    GI       G  ++D  ++   + +T   +  A+ A  +   +GA  A++    
Sbjct: 176 VLAKYPGIKIEQEQTGIWLRDKGMTLVNDWLTQGREFQAVVANNDEMAIGAAMALKQAGT 235

Query: 242 QK-DIKVFGWDLTKQAITGIDAGYVAGVIQQDPAEMGAAAVKALKTVADGGTVEKTIAVP 300
           +K  + + G D T   +  I  G +A  + QD       ++     +     VE+ + VP
Sbjct: 236 EKGSVLIAGVDGTPDGLNAIKKGEMAVSVFQDAKGQADGSIDTAVKMVKKQPVEQAVWVP 295

Query: 301 VTIVTKANVEPYR 313
             ++T  NV+ ++
Sbjct: 296 YRLITPENVDQFK 308