Pairwise Alignments

Query, 317 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 322 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 17/262 (6%)

Query: 56  KAAKEAGVKLVIFNANNDPAAQNSAIETYIQQKVDGIAVVAIDVNGIMPAVKQAAAANIP 115
           +AAK   V+L+I +  +    Q + +E  I+Q+VD + V   +  G+   V+QA  A IP
Sbjct: 59  EAAKHPDVELIITDGEDRTEKQVADVENLIRQEVDALLVSPKESAGLTGVVQQAIDAKIP 118

Query: 116 VVAIDAILPEGPQKAQIGVDNGKAGADMGKFFLDYVKSDMGGKAK-----IGVVGALNSF 170
           V  +D  +        +G DN   G   G++ ++     +GGK K     + + G + + 
Sbjct: 119 VFVLDRNVETDQYTQFVGGDNKLIGRAAGEYAVEL----LGGKGKAEGNIVEIWGGMGTQ 174

Query: 171 IQNIRQKGFEDTIKDKTGITTAGVVDGQN---VQDTALSAAENLITGNPDMTAIYATGEP 227
             + R  GF +    + GI    ++D Q+    QD A +     +  N  +  +Y   +P
Sbjct: 175 PAHDRHDGFHEFTDKEPGI--KNLLDQQSGDWKQDQAYNIMATALRNNEKIDLVYGHNDP 232

Query: 228 ALLGAVAAVESQSKQKDIKVFGWD-LTKQAITGIDAGYVAGVIQQDPAEMGAAAVKALKT 286
              GA  A +   ++K++K  G D L  + +T ++ G +        A  GA  ++    
Sbjct: 233 MAYGAYLAAKDAGREKEMKFIGIDALPNEGVTWVNNGELTATFLY--ATPGAEGLRQAVK 290

Query: 287 VADGGTVEKTIAVPVTIVTKAN 308
              G  VEKT+ +    VTK N
Sbjct: 291 FLKGEKVEKTVTLDTMKVTKEN 312