Pairwise Alignments

Query, 654 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 629 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  287 bits (735), Expect = 9e-82
 Identities = 185/614 (30%), Positives = 296/614 (48%), Gaps = 33/614 (5%)

Query: 28  PDTDEPPPPEEMEPASDLTPEQAEEVRRKYLLKRFWISARGFWSRRGDALAWPFTLGLLV 87
           PD    P PE ++  +D    Q   +            AR FW             GL  
Sbjct: 4   PDPSPRPSPEPVKADTDALWPQVRSM------------ARAFWKSPARNRLIFLGGGLAT 51

Query: 88  MIGINVGFQYGINIWNRGIFDAIEKRDASTVYFLASIFPPLVLGSVFIVTSQVYVRMRIQ 147
           +I +    Q  +N WN+  +D++ ++D         +F  +    + +  SQ ++    +
Sbjct: 52  VIALTAFGQMWLNAWNQPFYDSLARKDMDGFIHQLWVFAGIAFLLLTLNVSQTWLNQSTK 111

Query: 148 RRWRSWLTKALVGRWIANGRYYQLNLIDGDHQNPEARLSEDMRIATEAPVDFVSGVIAAF 207
            + R  L + L+  W+   R ++L        NP+ R+ ED R  +E   D   G++ A 
Sbjct: 112 VKLREGLVRDLLDDWLQGRRAFRLAFNSEIGVNPDQRIHEDARHLSELTTDLGIGLLQAS 171

Query: 208 VSASTFIVVLWTIGGALTVSIGGAGVTIPGFLVIAAVIYAAITSTSIAFIARNFVKVSEV 267
           +  +TFI VLW +   + + I G  + IPG++V  A++YA I S     +    V+++ +
Sbjct: 172 LLLATFIGVLWGLSRGIVLHIDGQVLAIPGYMVWCALLYAGIASLLSWKVGSPLVRLNAL 231

Query: 268 KNQVEAEFRYTLTRVRENGESIALLGGEEEER----SDLDKRFGNVRRQWRLMAQQYMRT 323
           +   EA+ R+ L RV E+ E IAL GGE +ER    SDLD+  G +RR    +       
Sbjct: 232 RYAREADLRFNLVRVSEHMEGIALHGGEADERDRLSSDLDRVLGIMRR----IVGAVTGL 287

Query: 324 TVVSNGSMLIAPVVPLLLCAPKFLDGSMSLGQVMQAASAFTIVQSAFGWLVDNYPRLADW 383
           T ++ G      V P+L+ AP +  G++S G++M A  AF  VQ A  W +DN   +ADW
Sbjct: 288 TWITAGYGWFTLVAPILVAAPGYFHGNLSFGELMMAVGAFIQVQQALRWFIDNVSAIADW 347

Query: 384 NACARRVASLMMSLDGLERAEKSDTVGRI-VRGETEGETILSLKDVSVSLGDGTAVVKET 442
            A   RV+S    L  ++R    +  GRI     T+ + ILS   + V+   G   + + 
Sbjct: 348 RATLLRVSSFREGLQAMDRL--GEGRGRIDFAPSTDRQVILS--GLEVASPAGAISLSQP 403

Query: 443 DVEIGAGERVLVAGESGSGKSTLVRAISGLWPWGGGSVNFRADSRL--------FMLPQR 494
           +V I  G+ +L+ G+SG+GK+   RAI+GLWPWG G +    D  L          LP+ 
Sbjct: 404 EVVIEPGQHLLIIGDSGTGKTVFFRAIAGLWPWGKGRIGLPPDDDLQDREGDGVMFLPRH 463

Query: 495 PYIPAGTLRRAVCYPQPAESWTSEEIGAALDKVGLGQLKEKIEDEAPWDQTLSGGEKQRL 554
           PYIP GTLR A+ YPQ A+ +    +  AL  +GL  L  ++   A WD+ L+  E++ L
Sbjct: 464 PYIPPGTLRAAISYPQAADDFDDWALVEALGSMGLAHLAARLNRSARWDKELTDDERRCL 523

Query: 555 TFARLLLNAPDIIVMDEATAALDEKSQDKMMQTVIEELPDATIISVAHRAELEAFHSRKI 614
            FAR+ L  P +++MDEA   LD+ S  + M    E+L    +I++      + F  + +
Sbjct: 524 AFARVALRKPKVVIMDEAFDVLDDASLGRAMAIFREKLRKTIVITIGRPEVRDHFFDQVL 583

Query: 615 TLERRDGGAKLVSD 628
            L     G + + D
Sbjct: 584 RLSLDPAGPRFLPD 597