Pairwise Alignments

Query, 654 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 726 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score = 82.8 bits (203), Expect = 5e-20
 Identities = 101/428 (23%), Positives = 191/428 (44%), Gaps = 51/428 (11%)

Query: 213 FIVVLWTIGGALTVSIGGAGVTIPGF-LVIAAVIYAAITSTSIAFIARNFVKVSEVKNQV 271
           F+++++ + G L +     G  I G+ L++   + AAI  ++         K S +K+  
Sbjct: 300 FMLIIYIVAGDLAIIPVIGGCIIIGYTLLMQPRLKAAIEESN---------KFSSLKHGH 350

Query: 272 EAEFRYTLTRVRENGESIALLGGEEEERSDLDKRFGNVRRQWRLMAQQYMRT-TVVSNGS 330
             E   ++       ESI   G E   +    +  G+    W+L  ++   + T V+N +
Sbjct: 351 LIESLASI-------ESIKSSGAEGLVQKSWQQMIGHTAN-WQLKVKKISTSVTNVANFT 402

Query: 331 MLIAPVVPLLLCAPKFLDGSMSLGQVMQAASAFTIVQSAFGWLVDNYPRLADWNACARRV 390
           + ++ V  ++L   +  D  +S+G ++ A     I+ S     +    +LA         
Sbjct: 403 VQLSVVCVVILGVYRVADNDISMGGIIAAV----ILSSR---AISPMAQLAGLMTRGNHT 455

Query: 391 ASLMMSLDGLERAEKS-DTVGRIV-RGETEGETILSLKDVSVSL-GDGTAVVKETDVEIG 447
           AS +  LD +   E   +  G +V +   +G+  ++   VS +  G    V+    + I 
Sbjct: 456 ASALRQLDQIMTQEDEFENKGHLVSKHRLKGQ--INADHVSFNYPGSERPVLHPMSLSIA 513

Query: 448 AGERVLVAGESGSGKSTLVRAISGLWPWGGGSVNFRA-DSRLF----------MLPQRPY 496
            GER+ + G +GSGKSTL + + GL+    GS+ +   DS              LPQ   
Sbjct: 514 PGERIAIIGRNGSGKSTLAKLLVGLYQPTKGSLRYDGLDSAQIHPTDLRRNFGYLPQDIT 573

Query: 497 IPAGTLRRAVCYPQPAESWTSEEIGAALDKVGLGQLKEKIEDEA------PWDQTLSGGE 550
           +  GT+R  + +       T  ++  A+   G+ Q  + IE E          Q+LS G+
Sbjct: 574 LFHGTIRDNILFG--TRQVTEHQLIRAVQLSGVNQFTD-IETEGLDQQVGEGGQSLSRGQ 630

Query: 551 KQRLTFARLLLNAPDIIVMDEATAALDEKSQDKMMQTVIEELPDATIISVAHRAELEAFH 610
           +Q +  AR  LN P +++MDE TA+LD +++ + ++ +     + T++ + H+  L    
Sbjct: 631 RQTIALARATLNDPPVLLMDEPTASLDARAEKQFIRAMRNVSKERTLLLITHKMHLLNLV 690

Query: 611 SRKITLER 618
            R + L+R
Sbjct: 691 DRILVLDR 698