Pairwise Alignments

Query, 548 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  399 bits (1024), Expect = e-115
 Identities = 215/532 (40%), Positives = 336/532 (63%), Gaps = 10/532 (1%)

Query: 9   DVVLSVRNLTVDLPRGMERSHAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGLLSPV 68
           D +L+V  L++++ R  ++   VK +SFDL  GEI  I+GESGSGK++    ++ LL P 
Sbjct: 4   DKLLTVCGLSLEVARTGQQ--VVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPT 61

Query: 69  ITVSSGEIQFKGMDILAAKEEKIRPLRGQAVSIIFQDPLSALNPLMTVGDQVAEVLEAHG 128
           I V+ G + +KG D+L  KE ++R LRG  + ++FQ+P+++LNP MT+G Q+ E L  H 
Sbjct: 62  IKVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHT 121

Query: 129 VGTRETRNAKVLELLEEVGLPDPLLMRLQYPFRLSGGQRQRVMIAMALALDPDVLIADEP 188
             + + R + +L++L+ VG+ DP      YP   SGG RQR+M+A  + L P +LIADEP
Sbjct: 122 KASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEP 181

Query: 189 TTALDVTTQAQILELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKGYLVEQGRADQ 248
           TTALD   Q  ++EL+ ++ + +  +++ I+HD  +VA    R+VVMEKG +VE+GR + 
Sbjct: 182 TTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTED 241

Query: 249 VLINPVHPYTQRLVAAVPRMRSVERSIDEEVPVVLEVENLEKEYRSSGSFFRKARTVKAV 308
           +L  P HPYT++L++++P  R   R ID     ++   ++  +Y    S FRK +  +A+
Sbjct: 242 LLKAPQHPYTKKLLSSLP-FRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRAL 300

Query: 309 NNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKLLDPDGGAIRFDGRDIATMDESAFRALR 368
           + VS  + +G+ + +VG SGSGK++LGR +  L+    G I+F GR   T + + +R   
Sbjct: 301 HGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP-RTENWTDYRL-- 357

Query: 369 PYIQMIFQDPFASLNPRHTIGKIL--TVGPLAHGMALHEARTKALGILKLVGLDEQAYDR 426
              QM+FQDP++SL+PR TI  ++   + P+  G+     R + L  L+ VGL      R
Sbjct: 358 -NCQMVFQDPYSSLDPRMTIEALVEEALRPVP-GLDGKAKRKRTLETLEEVGLGVDYAGR 415

Query: 427 FPHEFSGGQRQRIGIARALMFDPVVLVADEAVSALDVSIQAQVLELLARVQREMKVAMIF 486
           +PHE SGGQRQR+ IARA+   P  L+ADE VSALDV+++AQVL+L + +Q+    + +F
Sbjct: 416 YPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLF 475

Query: 487 ITHDLRVASQICDDVLVMHKGTVVEQGPPTKIFRAPTHPYTQKLVAAIPGAD 538
           I+HDL V  Q+ D V+VM  G ++E+G    IF +P   YT++L++AIP  D
Sbjct: 476 ISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIPALD 527



 Score =  186 bits (473), Expect = 2e-51
 Identities = 113/269 (42%), Positives = 159/269 (59%), Gaps = 17/269 (6%)

Query: 11  VLSVRNLTVD------LPRGMERSHAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGL 64
           ++S R++ VD      L R  +   A+  +S D+H GE++ ++G SGSGK+    TI GL
Sbjct: 274 MISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGL 333

Query: 65  LSPVITVSSGEIQFKGMDILAAKEEKIRPLRGQAVSIIFQDPLSALNPLMTVGDQVAEVL 124
               +T S G IQF+G      + E     R     ++FQDP S+L+P MT+   V E L
Sbjct: 334 ----VTESEGRIQFQGRP----RTENWTDYRLNC-QMVFQDPYSSLDPRMTIEALVEEAL 384

Query: 125 EAHGVGTRETRNAKVLELLEEVGLPDPLLMRLQYPFRLSGGQRQRVMIAMALALDPDVLI 184
                   + +  + LE LEEVGL      R  YP  LSGGQRQRV IA A+A  P  LI
Sbjct: 385 RPVPGLDGKAKRKRTLETLEEVGLGVDYAGR--YPHELSGGQRQRVAIARAIARRPRFLI 442

Query: 185 ADEPTTALDVTTQAQILELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKGYLVEQG 244
           ADEP +ALDVT +AQ+L+L   +QKR   S +FI+HD GVV ++ADRVVVM+ G ++E+G
Sbjct: 443 ADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEG 502

Query: 245 RADQVLINPVHPYTQRLVAAVPRMRSVER 273
             D +  +P   YT+RL++A+P +   E+
Sbjct: 503 DRDTIFDSPKEAYTRRLLSAIPALDQNEK 531