Pairwise Alignments

Query, 316 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  203 bits (516), Expect = 5e-57
 Identities = 108/320 (33%), Positives = 192/320 (60%), Gaps = 17/320 (5%)

Query: 1   MLTFLLHRIWQSLVLLLLVSIIGFAILNLAPGGPLSQF------ALTPGMTREALDRIAH 54
           ML F L R+ Q +  +++V+++ F I ++ PG   +        A  P M    + R+  
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQM----IARLNE 56

Query: 55  QMGLDRPLPIQYLDWAWRLLQGDWGKSYRDQRPVLDIISGHLFATLLLMVSSTVVSVLVG 114
           + GL++PL  +++ +   L Q D G S+R ++PV+D+I+  ++A+L L +++ + ++++ 
Sbjct: 57  EFGLNKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVIS 116

Query: 115 TWIGIKGAIKRYTLFDYTATVGAMIALSIPTFWFGLVAIYVFALRLKWLPAGNMYTIGDQ 174
             +G   A++  ++ D    +GA+  LS+P FW GL+ +Y+FAL+L WLP+   +  GD 
Sbjct: 117 VPLGFVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPS---FGYGDG 173

Query: 175 SLYDYAIHLIMPSLVLALVNIAVWSRYMRTATLDVINQDFVRTARAKGLTPRRVLMKHVV 234
           S  +    LI+P++ L +  +A+ +R  R   LDV+N DF+RTA +KG++  +V+  HV 
Sbjct: 174 SFRN----LILPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVA 229

Query: 235 GNALLPMITLAGLQLPTILGGALVTETVFTWPGMGRLFLDSLGYHDYPVVMGLLMFSAIL 294
            NAL+ ++T  GLQ  +++G A+V E +F WPG+G L +DS+   D PVV G ++   + 
Sbjct: 230 RNALVLIVTTVGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLW 289

Query: 295 VLFGSLLADLLVALVDPRIR 314
            L  +   DL+ A +DPRI+
Sbjct: 290 FLVINTAVDLIYAAIDPRIK 309