Pairwise Alignments

Query, 296 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 298 a.a., peptide transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  237 bits (604), Expect = 3e-67
 Identities = 119/279 (42%), Positives = 178/279 (63%), Gaps = 7/279 (2%)

Query: 19  QNRT---LRRFARHKLAVLGVIMIMIMIFACVVGPYLLPYD---ELFIDLRARFAP-PLT 71
           +NRT     R     LA++G+ +I++++ A  + P+++PYD   + F  L    AP P  
Sbjct: 13  ENRTPGVWTRLLHRPLALIGLAVIIVVVGAAALAPWVVPYDPHEQFFEGLTIEGAPLPPN 72

Query: 72  GYHIFGTDPLGRDIAARLFNAGRISLLVGFFAMVLSTLIGTVIGVVAGYYGGRIGAILMR 131
                GTD +GRD+ +RL    R SL++G  A  ++ +IG+++G+ AGY+ G +  +LMR
Sbjct: 73  SQFWLGTDLVGRDLLSRLIYGARTSLVIGVVANGIAVVIGSLVGIAAGYFRGWVDTVLMR 132

Query: 132 FVDAFLSFPSIFLLLALAAFVKPSPFMITLIIAVTSWMEIARLVEAEVRSLRERDFVMAA 191
           F D  ++FP++ L + LAA   PS +++ ++IA+ +W++IAR+V  E RS+ ERDFV A 
Sbjct: 133 FTDLMMAFPALLLAIVLAAIFTPSLWIVAMVIAMVNWVQIARVVYTETRSIAERDFVTAE 192

Query: 192 RMLGLPNGWIMFRELLPNAIGPIIVAATLTVARAILLEAYISFLGYGIQPPLPSWGNMLN 251
           R +G   G I+FR +LP+ +  IIV ATL +A  +LLEA +SFLG G+QPP+PSWGN++ 
Sbjct: 193 RAMGAGAGRILFRHILPHLLSTIIVWATLGIATTVLLEATLSFLGIGVQPPIPSWGNIIF 252

Query: 252 GAQQYLDKAPWLAIIPGVAITLAVTSFNFIGDGLRDALD 290
             Q Y   APWL  IPG AI     +FN +GD LRD LD
Sbjct: 253 ENQTYFTSAPWLVFIPGAAILALALAFNLVGDALRDVLD 291