Pairwise Alignments

Query, 309 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 294 a.a., N-Acetyl-D-glucosamine ABC transport system, permease protein 1 from Xanthomonas campestris pv. campestris strain 8004

 Score =  124 bits (312), Expect = 2e-33
 Identities = 78/283 (27%), Positives = 138/283 (48%), Gaps = 5/283 (1%)

Query: 23  YLLLAPMLIWFAVFLYKPMYG-LVIAFQDFSIFRGIEKSP--WVGFANFVELFRNDMFVR 79
           ++  AP ++   +F   P++  LV++  DF ++   + S   +VG  N++EL +  +F +
Sbjct: 10  WVFAAPSILVLGMFFGVPVFAALVLSVTDFDLYALADSSHLRFVGLGNYIELLQTPLFWK 69

Query: 80  SFWNTITISGLGLIFAFPVPIILALMFNEVQNGTARSWAQTVVYLPHFISVVIVAGIVIN 139
           S WNT     LG+  +  V +  AL+ N  +    ++  +T ++ P   ++V VA I   
Sbjct: 70  SLWNTTYFVLLGVPMSIAVSLGAALLLN-AKASRFKALFRTALFAPVVTTLVAVAVIWRY 128

Query: 140 FLSPSIGIVNLMLKGLGFEPIYFLTQPEWFRPVYIGSSVWKEAGFESIVYLAAIAGVSPT 199
                 G+VN  L  LG  PI +L  P W  P  +  +VWK  G+  +++LA +  +   
Sbjct: 129 LFHIKYGLVNFGLSHLGIAPIDWLGDPRWAMPTIMLFAVWKNFGYNMVIFLAGLQAIPQD 188

Query: 200 LYESARVDGASRWQMMWRITLPCILPTIVIMLIIRIGNLVEVGFEYIILLYRPSTYETAD 259
           LYE+AR+DGASRW+    ITLP + P ++++ +I I    ++  E  ++        T  
Sbjct: 189 LYEAARIDGASRWKQFLHITLPMLGPVLMVVGVITISGYFQLFAEPYVMTRGDPLQSTVS 248

Query: 260 VVSTFIYRTGLQGTQYDLATAAGLFNAVIAFVLVYSANRISRK 302
           V+  F++  G +      A+A      +I   +     R  RK
Sbjct: 249 VL-YFMFEEGFKWWNLGRASAVAFLLFLIILTVTTVMLRFGRK 290