Pairwise Alignments

Query, 309 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 304 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score = 87.8 bits (216), Expect = 3e-22
 Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 28/267 (10%)

Query: 18  RDWQLYLLLAPMLIWFAVFLYKPMYGLVIAFQDFSIFRGIEKSPWVGFANF-VELFRNDM 76
           R WQL +LLAP ++ +A+F   P+   +      +   G+    +VG  N+   LF  D 
Sbjct: 5   RAWQLAVLLAPAVLIYALFSALPLLDTLRLGFYTANDAGVRS--FVGLDNYRTILFDPDW 62

Query: 77  ---FVRSFWNTITISGLGLIFAFPVPIILALMFNEVQNGTARSWAQTVVYLPHFISVVIV 133
              F  + WN +    + +    P+ ++LA +F+      AR++ +T+++LP  +SVVI+
Sbjct: 63  SAAFWNAMWNNVKFFCIHMALQNPIGLLLATLFSLKGLRGARTY-RTLIFLPTLLSVVII 121

Query: 134 AGIVINFLSPSIGIVNLMLKGLGFEPIYFLTQPEWFRPVYIGS-----------SVWKEA 182
             I    LSP  G+   +L  +G          +WF P ++G            SVW+  
Sbjct: 122 GFIWQLILSPLWGVGEKLLGTVGLA--------DWFAP-WLGQESTALLTLSLISVWQYV 172

Query: 183 GFESIVYLAAIAGVSPTLYESARVDGASRWQMMWRITLPCILPTIVIMLIIR-IGNLVEV 241
           G   ++  AA+  V   + E+A  +GAS  ++ W+I LP I PT+ ++ I+  + N    
Sbjct: 173 GIPMMLIYAALLAVPEEVLEAAHAEGASAMRIFWQIKLPLIYPTLGLVTILTFVANFNAF 232

Query: 242 GFEYIILLYRPSTYETADVVSTFIYRT 268
              Y +          +D++ T+ YRT
Sbjct: 233 DLIYSVKGALAGPNYASDLLGTYFYRT 259