Pairwise Alignments

Query, 309 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 315 a.a., sugar ABC transporter permease from Bifidobacterium breve UCC2003

 Score =  100 bits (249), Expect = 4e-26
 Identities = 72/287 (25%), Positives = 139/287 (48%), Gaps = 22/287 (7%)

Query: 23  YLLLAPMLIWFAVFLYKPMYGLVIAFQDFSIFRGIEKSPWVGFANFVELFRNDMFVRSFW 82
           Y +  P  I FA FLY P    V     F+  +G     ++G  N++ LF+++    ++ 
Sbjct: 38  YWMAVPAAIIFAFFLYLPFLDGVK--YSFTNSQGYGDYKFIGLKNYIALFQDNRVGHAYL 95

Query: 83  NTITISGLGLIFAFPVPIILALMFNEVQNGTARSWAQTVVYLPHFISVVIVAGIVINFLS 142
            T  I+ L  +    + + L++M N       ++  + + ++P+ +SV+++ G V  ++ 
Sbjct: 96  FTFFIAILITVLINVIALFLSVMLNS--KIAFKNGFRAIFFIPYTLSVLVI-GYVFKYIF 152

Query: 143 ----PSIGIVNLMLKGLGFEPIY--FLT--QPEWFRPVYIGSSVWKEAGFESIVYLAAIA 194
               P +G      K LG + +    LT  Q  W   V++  +VW+   +  ++YLA + 
Sbjct: 153 MNPLPELG------KALGIKWLSTSLLTNEQLSWIPIVFL--AVWQGIAYSVLIYLAGLQ 204

Query: 195 GVSPTLYESARVDGASRWQMMWRITLPCILPTIVIMLIIRIGNLVEVGFEYIILLYRPST 254
            +   +YE+A +DG + WQ  W+IT P I P   I L++ + N +   F+ ++ L     
Sbjct: 205 TIDDEIYEAAAIDGVNPWQKFWKITFPLIGPFFTINLVLSMKNALGT-FDQVVALTEGGP 263

Query: 255 YETADVVSTFIYRTGLQGTQYDLATAAGLFNAVIAFVLVYSANRISR 301
             + + V+  I++ GL G +Y   TA  +   ++  ++ +   RISR
Sbjct: 264 NSSTETVTYLIWKGGLTGGEYAYQTANAVLFFIVLAIIAFVQLRISR 310