Pairwise Alignments

Query, 442 a.a., tRNA modification GTPase from Agrobacterium fabrum C58

Subject, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

 Score = 67.8 bits (164), Expect = 7e-16
 Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 36/283 (12%)

Query: 99  LDNLGGLRPADAG--EFSRRAFENGKMDLLEVEGL------ADLLQAETEMQRRLAVEQS 150
           +D   GL  AD    +  RR  +   + + +V+G+      A+  Q   +   ++A    
Sbjct: 89  VDGRAGLTVADEAIAQHLRRIEKPAILVVNKVDGIDADAASAEFWQLGMDQMYQIAAAHG 148

Query: 151 SGQLSALYDGWANRLTRARALIEAELDFADEEDVPDSVATQVWEAMAALKGEINAHLQGG 210
            G + AL D   N         +A+L+    E+ P+    +  E  A  + +    L   
Sbjct: 149 RG-VGALIDRVLNPFAEQMESEQAQLEDLTNEEDPEEEQLEYSEEEAEAEYKRLQDLP-- 205

Query: 211 GNGEIIRDGFKVALVGEPNAGKSTLLNALSGREVAIVTDIAGTTRDVLSVDINLDGYLVR 270
                     K+A++G PN GKSTL N + G E  +V D+ GTTRD + + +  D     
Sbjct: 206 ---------IKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYV 256

Query: 271 IFDTAGIRETQ---DVVEREGVRRAVLTAETADLILILQDNDSTPKQSIGSFDNQRSLRV 327
           + DTAG+R  +   + VE+  V + +   E A+++L++ D     +++I   D       
Sbjct: 257 LIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD----ARENISDQD------- 305

Query: 328 RTKTLLRSRASDDDFDLSISAKEGIGLDELRRALKREIEKRVG 370
               L  +  S     ++++  +G+  D ++  +K+E+++R+G
Sbjct: 306 -LSLLGFALNSGRSIVIAVNKWDGLSFD-VKEHVKKELDRRLG 346



 Score = 60.1 bits (144), Expect = 2e-13
 Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 17/221 (7%)

Query: 222 VALVGEPNAGKSTLLNALSGREVAIVTDIAGTTRDVLSVDINLDGYLVRIFDTAGIRETQ 281
           VALVG PN GKSTL N L+    A+V D  G TRD       L  +   + DT GI  ++
Sbjct: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSE 64

Query: 282 DVVEREGVRRAVLTAETADLILILQDN-------DSTPKQSIGSFDNQRSLRVRTKTLLR 334
           + VE +  ++++   + AD++L + D        D    Q +   +    L V     + 
Sbjct: 65  EGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVDGID 124

Query: 335 SRASDDDF-------DLSISAKEGIGLDELRRALKREIEKRVGSGQTLVPARARHKKRLE 387
           + A+  +F          I+A  G G+  L   +     +++ S Q  +      +   E
Sbjct: 125 ADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNEEDPEE 184

Query: 388 ETLNYVSDALDSE---TLDLAIRSEYLRLAATSLGRITGRV 425
           E L Y  +  ++E     DL I+   +         +T R+
Sbjct: 185 EQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRI 225