Pairwise Alignments

Query, 400 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 370 a.a., dehydratase involved in L-fucose catabolism (from data) from Sinorhizobium meliloti 1021

 Score =  112 bits (280), Expect = 2e-29
 Identities = 98/391 (25%), Positives = 162/391 (41%), Gaps = 63/391 (16%)

Query: 12  VILDTDEPRLKGHGLTFTIGRG-NDICCMAIEAMRHLVVGTDLATVTENPGKYWRHLTSD 70
           ++  TD     G G ++TIG G + +  +  + +  +++G D   +       W+ +   
Sbjct: 34  IVTITDADGATGTGYSYTIGTGGSSVMRLLSDHLVPILLGEDADCIEA----LWQKMEFA 89

Query: 71  SQLRWIGPDKGAMHLATGAVVNAVWDLLAKKAGKPVWQLVADMSPEEIADIVDYRYLTDV 130
           +    IG       LA  AV  A+WDL AKK   P+W+L                     
Sbjct: 90  THATTIG---AITALALAAVDTALWDLRAKKQKLPLWKLAG------------------- 127

Query: 131 LTRDDALAILRRAEAGKKERIETLKNEGYACYTTSAGWLGYDDAKLRRLCQEAIDAGFNH 190
                          G KE            YTT  GWL  +   L     +A   GF+ 
Sbjct: 128 ---------------GAKESCPL--------YTTEGGWLHIEKQALVDDALQAKANGFSG 164

Query: 191 VKMKVGRDL-EDDIRRLTITREVIGPDRYLMIDANQVWEVDQAIEWVNKLAFSKPFFIEE 249
            K+K+G+    +D  RL+  R  +G    +M D NQ + VD+AI    +L      +IEE
Sbjct: 165 SKVKIGKPSGAEDYDRLSAMRAALGDGFEIMTDCNQGFTVDEAIRRAARLRELDLAWIEE 224

Query: 250 PTSPDDIAGHRKIRAAIGSVKVATGEMCQNRIMFKQFIAEGAIDVVQIDSCRMGGLNEVL 309
           P   DD+ GH ++  +  +  +A GE   +   F++++ +GA  +VQ+D  R+GG+   L
Sbjct: 225 PLPADDLDGHIRLTRSTPT-PIAVGESIYSIRHFREYMQKGACSIVQVDVARIGGITPWL 283

Query: 310 AVLLIAAKYNLPVWPHAGGVGLCEYVQHLSMIDYLVVSGTKEGRVIEYVDHLHEHFIEPC 369
            V   A  +++PV PH            L  +   +V     G+ +EY+  L +      
Sbjct: 284 KVAHAAEAFDIPVCPH-----------FLMELHVSLVCAVPNGKYVEYIPQLDDLTQMGM 332

Query: 370 DIRNAAYMPPKLPGFSIEMKPESIETYTFEE 400
           +IR    + P  PG  I    E+++  +  E
Sbjct: 333 EIREGRAIAPSNPGIGIAWDWEAVKARSVAE 363