Pairwise Alignments

Query, 370 a.a., 3-isopropylmalate dehydrogenase from Agrobacterium fabrum C58

Subject, 335 a.a., isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  172 bits (435), Expect = 2e-47
 Identities = 126/364 (34%), Positives = 190/364 (52%), Gaps = 34/364 (9%)

Query: 1   MTVRSLFLLPGDGIGPEAMTEVRKLIEYMNSAHNAGFTVSEGLVGGSAYDAHGVAISDAD 60
           M+ R++ ++PGDGIGP  +    K+++         F  +    G +A +  G  +    
Sbjct: 1   MSKRTITVIPGDGIGPSIIDSALKILDKAGCDFEYEFADA----GLAALEKQGELLPQRT 56

Query: 61  MEKALAADAILFGAVGGPKWDGVPYEHRPEAGLLRLRKDLELFANLRPAICYPALAAASS 120
           +E        L G +  P  +G    +      + LRK   L+AN+RP + +    A   
Sbjct: 57  LELIEKNRITLKGPLTTPVGEGFTSIN------VTLRKKFGLYANVRPVLSFKGTQAR-- 108

Query: 121 LKPELVEGLDILIVRELTGGVYFGEPKQIIDLGNGQKRGIDTQIYDTFEIERIASVAFEL 180
                 E +DI+ VRE T G+Y G  +++ + G+  +    T I      E+IA+ A+EL
Sbjct: 109 -----YENIDIITVRENTEGMYSGHGQKVSEDGSTAEA---TSIVTRQGAEQIATFAYEL 160

Query: 181 ARSRDNR-VCSMEKRNVMKS-GVLWNQVVTETHAAKYKDVQLEHMLADAGGMQLVRKPKQ 238
           AR    + V  + K N+MKS   L+ +V  E  + +Y D++ E M+ DA  M+LV  P+ 
Sbjct: 161 ARKESRKKVTIVHKANIMKSTSGLFLKVAREV-SLRYPDIKTEEMIVDATCMKLVMNPEN 219

Query: 239 FDVIVTDNLFGDMLSDVAAMLTGSLGMLPSASLGAPDAKTGKRKAMYEPVHGSAPDIAGK 298
           FDVIVT NLFGD+LSD+ A L G LGM       AP A  G+  A++E VHGSAPDIAGK
Sbjct: 220 FDVIVTTNLFGDILSDLCAGLVGGLGM-------APGANIGRDAAIFEAVHGSAPDIAGK 272

Query: 299 SIANPIAMIASFAMCLRYSFNMVDEATKLEAAIANVLDKGIRTADIMADGCRQVGTSDMG 358
           ++ANP ++I +    L Y   M D+A  +  A++ V+++G RT     D     GT+D  
Sbjct: 273 NLANPTSVILASIQMLEY-LGMADKAAPIRKAVSAVIEEGDRTT---RDLGGTHGTTDFT 328

Query: 359 DAVL 362
            AVL
Sbjct: 329 QAVL 332