Pairwise Alignments

Query, 160 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 155 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Klebsiella michiganensis M5al

 Score = 72.0 bits (175), Expect = 4e-18
 Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 7/160 (4%)

Query: 1   MRISIFAVGRLKSGPEKDLAARYIERLAKTGPAIGLEFSRVIEVGESRASNAETRK-REE 59
           M++ + AVG       +   + Y+ R  K  P     F  V      R  NA+ ++  E+
Sbjct: 1   MKLHLVAVGTKMPDWVQTGFSEYLRRFPKDMP-----FELVEIPAGKRGKNADIKRILEK 55

Query: 60  AAMLEKHLADGAVLVLLDERGKALDSPAFASLFGDLRDSGKRDLVIAIGGADGLDSALYD 119
              +    A    +V LD  GK  D+P  A      +  G RD+ + IGG +GL  A   
Sbjct: 56  EGEMMLAAAGKNRIVTLDIPGKPWDTPQLARELERWKQDG-RDVSLLIGGPEGLSPACKA 114

Query: 120 KATAVLNLGKLTWPHQIVRILIAEQLYRAVTILSGHPYHR 159
            A    +L  LT PH +VR+L+AE LYRA +I + HPYHR
Sbjct: 115 AAEQSWSLSTLTLPHPLVRVLVAESLYRAWSITTNHPYHR 154