Pairwise Alignments

Query, 442 a.a., carboxy-terminal protease from Agrobacterium fabrum C58

Subject, 458 a.a., S41 family peptidase from Rhodopseudomonas palustris CGA009

 Score =  527 bits (1357), Expect = e-154
 Identities = 276/451 (61%), Positives = 349/451 (77%), Gaps = 11/451 (2%)

Query: 1   MIRKVSLLLIGGLMGAT-AMSVIYSASM----PAQAAGPSTYKELSIFGDVFERVRAQYV 55
           M+RK S++L+  + GA   + V    +M     A+AA   TY++L++FGDVFERVR+ YV
Sbjct: 1   MMRKTSVILLSAVTGAALTLFVTQPRTMLMGATARAATSDTYRQLNLFGDVFERVRSDYV 60

Query: 56  TPPDDEKLVENAINGMLSSLDPHSSFMNAKDANDMRTQTKGEFGGLGIEVTMENELVKVI 115
             PDD KLVE+AI+GML+ LDPHSS+M+AK   DM+ QT+GEFGGLGIEVTME+ L+KV+
Sbjct: 61  EKPDDSKLVESAISGMLAGLDPHSSYMDAKSFRDMQVQTRGEFGGLGIEVTMEDGLIKVV 120

Query: 116 SPMDDTPASRAGILAGDYISEIDGTPVRGLKLEQAVEKMRGAVKTPIKLTVIRKGADKPL 175
           SP+DDTPAS+AGILA D I+ +D   V+GL L QAVEKMRG V T I+L ++RKG D P+
Sbjct: 121 SPIDDTPASKAGILANDIITNLDDEAVQGLTLNQAVEKMRGPVNTKIRLKIVRKGQDNPI 180

Query: 176 EFTVVRDVIAVRAVKSRVEGDNVGYLRVISFTEKTYDDLEKAIKKIKADVPADKLKGYVL 235
           E T+VRD I VR+V++RVE  ++GY+R+ +F E+T + L+K I  +   + ADKLKG++L
Sbjct: 181 EVTLVRDNIRVRSVRARVEDSDIGYIRITTFNEQTTEGLKKEIANLTNQIGADKLKGFIL 240

Query: 236 DLRLNPGGLLDQAINVSDAFLERGEVVSTRGRNPDETRRFNATAGDLTDGKPVIVLVNGG 295
           DLR NPGGLL++A+ VSDAFL+RGE+VSTRGRN +ET+R +A AGDLT GKPVIVL+NGG
Sbjct: 241 DLRNNPGGLLEEAVTVSDAFLDRGEIVSTRGRNAEETQRRSAHAGDLTKGKPVIVLINGG 300

Query: 296 SASASEIVAGALQDLRRATVVGTRSFGKGSVQTIIPLGEA-GALRLTTALYYTPSGKSIQ 354
           SASASEIVAGALQD +RATVVGTRSFGKGSVQTIIPLG   GALRLTTA YYTPSGKSIQ
Sbjct: 301 SASASEIVAGALQDHKRATVVGTRSFGKGSVQTIIPLGSGNGALRLTTARYYTPSGKSIQ 360

Query: 355 GTGIEPDIKVEQPLPAELQGRVTAEGESSLSGHIKGQSETDEGSGSSAYVPPEAKDDIQL 414
             GI PDI+V Q +PA+L+ R   +GE+SL GH+KG ++ DE +GS +YVPPEAKDD  L
Sbjct: 361 AKGITPDIEVMQDVPADLKARTDTKGEASLRGHLKG-ADGDEKTGSQSYVPPEAKDDKAL 419

Query: 415 NYALDLLRGAKTDPSFPPNP----DKAVVNK 441
             A DLL G K + S P +     DKA ++K
Sbjct: 420 KAAADLLHGIKVNASAPADKQTTGDKAAIDK 450