Pairwise Alignments

Query, 442 a.a., carboxy-terminal protease from Agrobacterium fabrum C58

Subject, 582 a.a., carboxy-terminal processing protease precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  194 bits (494), Expect = 5e-54
 Identities = 117/306 (38%), Positives = 180/306 (58%), Gaps = 9/306 (2%)

Query: 53  QYVTPPDDEKLVENAINGMLSSLDPHSSFMNAKDANDMRTQTKGEFGGLGIEVTMENELV 112
           QYV   +   LVE A+  +L+ LDPHS+++ A++  ++ ++ +G F G+GI+ T++N+ +
Sbjct: 57  QYVDTVNMTDLVEKAMPQILAELDPHSTYIPAQNLEEVNSELEGSFSGIGIQFTIQNDTI 116

Query: 113 KVISPMDDTPASRAGILAGDYISEIDGTPVRGLKL--EQAVEKMRGAVKTPIKLTVIRKG 170
            V + +   P+ + G++AGD I  +D +   G KL  E A+  ++G   + +KL V R G
Sbjct: 117 HVNAVIQGGPSEKVGLMAGDRIVNVDDSLFVGKKLNNELAMRTLKGPKGSQVKLGVKRVG 176

Query: 171 ADKPLEFTVVRDVIAVRAVKSR-VEGDNVGYLRVISFTEKTYDDLEKAIKKIKADVPADK 229
             K L+FT+ R  I    V +  +  D++GY++V  F   ++ +L  A+    A +   K
Sbjct: 177 EPKLLDFTITRGDIPQNTVDAAYMLNDDIGYVKVSKFGRTSHVELLNAL----AQLNHKK 232

Query: 230 LKGYVLDLRLNPGGLLDQAINVSDAFLERGE-VVSTRGRNPDETRRFNATAGDLTDGKPV 288
            KG ++DLR N GG ++ AI + + FL  G+ +V T+GR       F    G      P+
Sbjct: 233 CKGLIIDLRGNTGGYMEAAIRMVNEFLPEGKLIVYTQGRKYPRAEEFANGTGSCQK-MPL 291

Query: 289 IVLVNGGSASASEIVAGALQDLRRATVVGTRSFGKGSVQTIIPLGEAGALRLTTALYYTP 348
           +VL++ GSASASEI  GA+QD  R TVVG RSFGKG VQ  I   +  A+RLT A YYTP
Sbjct: 292 VVLIDEGSASASEIFTGAIQDNDRGTVVGRRSFGKGLVQQPIDFSDGSAIRLTIARYYTP 351

Query: 349 SGKSIQ 354
           SG+ IQ
Sbjct: 352 SGRCIQ 357