Pairwise Alignments

Query, 442 a.a., carboxy-terminal protease from Agrobacterium fabrum C58

Subject, 529 a.a., carboxy-terminal processing protease precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  211 bits (537), Expect = 4e-59
 Identities = 125/343 (36%), Positives = 205/343 (59%), Gaps = 12/343 (3%)

Query: 16  ATAMSVIYSASMPAQAAGPSTYKELSIFGDVFERVRAQYVTPPDDEKLVENAINGMLSSL 75
           A  + ++ +++  AQ+ G +  ++L +           YV   D++KLVE AI  ML+ L
Sbjct: 10  ALLVCLLATSAAQAQSFGSAAMRKLQMAEFAISNF---YVDKVDEDKLVEEAIIKMLAQL 66

Query: 76  DPHSSFMNAKDANDMRTQTKGEFGGLGIEVTMENELVKVISPMDDTPASRAGILAGDYIS 135
           DPHS++ +A++   M    +G F G+G++  M  + + V+ P+ + P+ + GILAGD I 
Sbjct: 67  DPHSTYSDAEEVKKMNEPLQGNFEGIGVQFQMIEDTLLVVQPVSNGPSEKVGILAGDRII 126

Query: 136 EIDGTPVRGLKL--EQAVEKMRGAVKTPIKLTVIRKGADKPLEFTVVRDVIAVRAV-KSR 192
            ++ + + G+K+  E  ++++RG   + + LT++R+G   PL FTV RD I + ++  S 
Sbjct: 127 AVNDSAIAGVKMSTEDIMKRLRGPKGSKVNLTIVRRGVQDPLVFTVKRDKIPILSLDASY 186

Query: 193 VEGDNVGYLRVISFTEKTYDDLEKAIKKIKADVPADKLKGYVLDLRLNPGGLLDQAINVS 252
           +    +GY+R+  F   T ++ +KA+K    D+    +K  +LDL+ N GG L+ AI+++
Sbjct: 187 MIQPKIGYIRINRFGATTAEEFKKAMK----DLQKQGMKDLILDLQGNGGGYLNAAIDLA 242

Query: 253 DAFLERGE-VVSTRGRNPDETRRFNATAGDLTDGKPVIVLVNGGSASASEIVAGALQDLR 311
           + FL + E +V T GR    +  F    G+  DG+ +IVLV+  +ASASEIV+GA+QD  
Sbjct: 243 NEFLGQKELIVYTEGRTAQRSEFFAKGNGEFRDGR-LIVLVDEYTASASEIVSGAVQDWD 301

Query: 312 RATVVGTRSFGKGSVQTIIPLGEAGALRLTTALYYTPSGKSIQ 354
           R  +VG RSFGKG VQ  I L +   +RLT A YYTP+G+ IQ
Sbjct: 302 RGIIVGRRSFGKGLVQRPIDLPDGSMIRLTIARYYTPAGRCIQ 344