Pairwise Alignments
Query, 1585 a.a., NAD-glutamate dehydrogenase from Agrobacterium fabrum C58
Subject, 1614 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Score = 1031 bits (2667), Expect = 0.0
Identities = 612/1575 (38%), Positives = 892/1575 (56%), Gaps = 46/1575 (2%)
Query: 33 LYGRASADDIEYYSAEMLAASAAHSFEALSHWTGDAPHISI-TTVEGVSPRDIPVTVLTI 91
LY S DD+ + L + + AL+ H+ + + +++ +
Sbjct: 38 LYAHMSKDDLNARNDSDLYGAVLSLWNALNKTPKGETHLRVFNPSQSKHGWQSTHSIIEV 97
Query: 92 IGRNMPFLYDSVMGEVTSSYRGLYLAVHPILVRDDEAQGYRLA---EPEDDPAENISLIQ 148
I +MPFL DSV + ++ +H L + AQ D E++++
Sbjct: 98 IQPDMPFLVDSVGMALNRMGITAHVMLHTPLAIERSAQEVTKVTYLNQSPDSTEHVAVFL 157
Query: 149 LHIAPLTPQA-ASALEERLRFVLTQVQSAYRDWRPMLTKLDEALDELSKRGSSRRKTERT 207
+ I + A ALE ++ VL V ++ DW M KL E + EL KR K E
Sbjct: 158 IEIDRQSSTADIKALEREIQSVLADVAASVNDWGAMSAKLSETIKELPKRPFPGEKQELE 217
Query: 208 EAVEFLNWLRNDNFTFLGMRDYTYSGKGKNAKIERGDGVGLGSLS-----DPDVRVLRLG 262
EA+ FL +L N +FT LG R Y + ++ LG ++ P+ +L L
Sbjct: 218 EAINFLTYLNNHHFTLLGYRQYDLKRVEGDVELVPNIASSLGLMNKHHKTQPEQGLL-LS 276
Query: 263 KNAVTTTPEILAFLDGPDFLIVTKANVKSIVHRRAYMDYIGIKRFDEDGNVIGELRIVGL 322
+ + E L LI+TK++ KS VHR AY+DYIGIKRFD+ GNVIGE R +GL
Sbjct: 277 SFSDSARKEALDH----SLLILTKSSAKSRVHRPAYVDYIGIKRFDKKGNVIGEDRFIGL 332
Query: 323 FTATAYTRSVKQIPLLRAKVADVERHFGFDPNSHSGRILQNTLEAYPRDDLFQIETDLLI 382
+ + Y RS ++IPLL KV V G P SH + L N LE PRD+L Q D L
Sbjct: 333 YASNVYNRSPREIPLLNEKVQRVLDRSGLTPRSHDYKALLNILENLPRDELIQANVDDLA 392
Query: 383 RFIEQIMELSDRPRVRVLARIDRFDRFVSAIIFVPREEYNSYVREKIGDYLSRVYDGHIS 442
++E+ DR ++++ R D F RF+S +++V ++ YN+ +R+ L++ ++
Sbjct: 393 HTAHGVLEMQDRDKLKLFVRKDGFGRFLSCLVYVSKDRYNTKLRQDTQRILAQHFNSKED 452
Query: 443 AYYPA-FPEGAVARVHFIVGRTEGKTPRIAQDKLEDAVSDIAARWIDHF-VALS-----E 495
+ F E +AR H+IV + + + +E+ + + A W D AL+ E
Sbjct: 453 VEFTTYFSESTLARTHYIV-KVDNNNMDVDVAAIENNLIEAARSWEDKLNTALNNALGEE 511
Query: 496 PGAPVLD-----VDQAYQEAFTPEEAIGDMPDILAAANGEPVRIEFYQQE--GQSDDTLS 548
G ++ +Q+Y+E P A+ DM + A + + + FYQ + +D+ +
Sbjct: 512 AGTHLMKRYANAFEQSYKEDVLPSSAVVDMQQLEALDDEHKLGMLFYQPQEAALNDNKVR 571
Query: 549 LKIFHRDGHLPLSRRVPLLENLGFNVISERTFDIGVVSEGEKRDIVLHDMELSVAAGTTL 608
LK+FH+D + LS +P+LEN G VI+ER +++ ++G I+ D ++V T
Sbjct: 572 LKLFHKDEPIHLSDVLPMLENFGLRVINERPYEV-TTADGSTFWIL--DFLMTVKVVNTD 628
Query: 609 DLPHYGPKLEEAFLAAFSGKVDNDNFNRLILACGLNVREVSVLRAYARYLRQTGIVYSQE 668
++ + + A + K+++D FNR+ILA GL REVSVLRAYA+Y+RQ +SQ
Sbjct: 629 NIADSQDRFQTALSQVWQKKLEDDGFNRIILASGLTGREVSVLRAYAKYMRQIDATFSQA 688
Query: 669 HISETLYKYPDISRNIFALFKAGFDPSIEEKKRVKKLAEIHKAIEAALSGVPNLDEDRTL 728
+I ET +YP I+ + +F F+P K + + L + + I L V +LD+DR +
Sbjct: 689 YIEETFGRYPQIADLLVKMFIRKFNP----KLKTRTLGKFMEQINLRLDEVSSLDDDRII 744
Query: 729 RRYVNAIDATLRTNYFQKNADGTPRDLLAFKFDPKHLDGLPDPRPFREIFVYGTEVEGVH 788
RRY++ I+ATLRTN++Q +A G + ++FKF P + +P P P EIFVY VEGVH
Sbjct: 745 RRYLDLINATLRTNFYQLDAKGESKSYISFKFMPSLIPEMPRPLPKFEIFVYSPRVEGVH 804
Query: 789 LRFGKVARGGLRWSDRGQDYRTEVLGLVKAQQVKNAVIVPVGAKGGFFPKNLPAGGSRDE 848
LR+GKVARGGLRWSDR +D+RTEVLGLVKAQQVKN VIVPVGAKGGF K LP G R+
Sbjct: 805 LRYGKVARGGLRWSDRREDFRTEVLGLVKAQQVKNTVIVPVGAKGGFVCKQLPTEGGREA 864
Query: 849 VFNAGREAYKTYIRTLLSITDNIVDDAIVPPADTLRLDGDDPYFVVAADKGTATFSDTAN 908
F G+E Y+ +IR LL ITDNI++ IV P D +R D DDPY VVAADKGTATFSD AN
Sbjct: 865 FFTEGQECYRIFIRALLDITDNILNGEIVHPVDVVRHDEDDPYLVVAADKGTATFSDIAN 924
Query: 909 GLAHEAGFWLDDAFASGGSAGYDHKKMGITARGAWETVKRHFREMDTDIQTTPFTVAGVG 968
++ E FWL DAFASGGS GYDHKKMGITA+G WE+VKRHFRE+ D QTT FT G+G
Sbjct: 925 SISLEYNFWLGDAFASGGSNGYDHKKMGITAKGGWESVKRHFREVGIDCQTTDFTCLGIG 984
Query: 969 DMSGDVFGNGMLLSEKIRLIAAFDHRDIFIDPDPDTDKSFAERKRLFELPRSSWQDYDRS 1028
DM+GDVFGNGMLLS+ +L+AAF+H IFIDP+PD S+ ER RLF LPRSSW+DY+
Sbjct: 985 DMAGDVFGNGMLLSKHTKLVAAFNHMHIFIDPNPDAATSYEERARLFALPRSSWEDYNSK 1044
Query: 1029 TLSAGAMIISRSEKSVTLTPEAVAAIGLDKSVATPFEIMTAILKAPTDLLWFGGIGTYIK 1088
+S G + RS KS+ L+ E +G +K TP E+M +LK P DL+W GGIGTY+K
Sbjct: 1045 LISKGGGVFLRSSKSIPLSAEMKQMLGTEKISMTPTEMMKELLKMPVDLIWNGGIGTYVK 1104
Query: 1089 AAVETNAEVGDRANDPIRVNATELRAKVIGEGANLGITQKGRIAYALAGGRCNSDAIDNS 1148
++ ETNAEVGDRAND +RVN ELRAK++GEG NLG TQ GRI YA GGR N+D +DN
Sbjct: 1105 SSRETNAEVGDRANDALRVNGRELRAKIVGEGGNLGCTQLGRIEYAANGGRINTDFVDNV 1164
Query: 1149 AGVNSSDVEVNIKIALASAVNSGRLTMPKRNQLLASMTPDVAQLVLRNNYQQSLAISLTE 1208
GV+ SD EVNIKI L + V G LT+ +RN+LL MT +V ++VL++ Q+ IS+T+
Sbjct: 1165 GGVDCSDNEVNIKILLNAMVTEGELTLKQRNRLLGEMTEEVGEIVLQDCKDQTRTISVTQ 1224
Query: 1209 RLGLANREELGRLMGALEATGQLNRKVETLPNNAEFSERYASGKPLTRPEIGVLLSYAKL 1268
G +E R + LE G+L+R +E LP+ E +ER A+G+ LTRPE+ VL++YAK+
Sbjct: 1225 VRGAEQLKEQIRFIQYLEKEGKLDRALEFLPSEEELTERLANGRALTRPELSVLVAYAKM 1284
Query: 1269 TLFDALVASPLPDEPYLQHLLLDYFPAKMQKNYANDIKAHRLHREIVATALANAVVNRGG 1328
L + L+ + ++ L LL+ YFP K+Q+ Y+ + H L EI+AT+LAN +VN G
Sbjct: 1285 VLKEQLLTPEITEDTLLSQLLIAYFPKKLQELYSARMVTHPLRGEIIATSLANELVNDMG 1344
Query: 1329 PGFVQKLADASGLLAADVVKAAVIVEDGFGLKRLWTEVDALDGKVGGQVQNGLYATITRI 1388
FVQ++ D +G AD + + FGL L + L+G V VQ + + R
Sbjct: 1345 LNFVQRMQDETGASVADAAICYTMAREVFGLAELTKSITDLNGIVPAVVQGEMLHQLRRN 1404
Query: 1389 FSDASRLYL----QTGSAGAAAGDMATEIERLKTAIKT--LSPAATKYRRELGVTEIDGV 1442
A R +L ++ S E+LK + + A + E+ + V
Sbjct: 1405 MRRACRWFLRHRNRSWSIEQTVAFFKPVFEQLKANVHSYLAEEEAAGIQAEINALIKENV 1464
Query: 1443 PSGLLEELDTLSLLVYVPEIMRIAESAGTTLARAAESYATVSSTFRVARLLDASQRITPA 1502
P + + +S L +I +IA++ T+A AE+Y + + + L+
Sbjct: 1465 PQDVASTVANMSTLFSTLDIAQIAQAEEKTVALVAETYFKLGARVELHWFLEQISAQPVT 1524
Query: 1503 DHYESLALLRSQDQISSSRR---RIVISALTEYAKEKDPVQAWYAADRVRVNRIVSELGA 1559
+H+++LA ++++ +R +V+ + + + W ++ + R L
Sbjct: 1525 NHWQALARAAFREELDWQQRALTSVVLRTCSATCNAQSVISLWIETNQALLERWFHMLAD 1584
Query: 1560 LSESGDTNLARLTVA 1574
S + A+ +VA
Sbjct: 1585 FKTSQNHEFAKFSVA 1599