Pairwise Alignments

Query, 335 a.a., C4-dicarboxylate binding protein from Agrobacterium fabrum C58

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 67/303 (22%), Positives = 128/303 (42%), Gaps = 3/303 (0%)

Query: 2   RKLLLTTTAIAFAVGAAAPAMAEFN-SRNIRVSNGINQDHPVGNGIKAMQACLDDKSGGK 60
           R+  L   A   A+  A P++     +R +R+       HP  N    +   L  ++ G+
Sbjct: 5   RRTFLGGVAAGAALSLATPSLVRAQETRTLRLGIVTPPGHPWNNAALKVGEALKAETNGR 64

Query: 61  LKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGLIPSLGVFDLPFLF-ANDKEAD 119
           L ++ F  G LG +    Q ++SG  +     ++ L   IP++   + P++  +  K A 
Sbjct: 65  LSISVFPAGQLGNEAAMLQQMQSGALDLGWIMTAELGSRIPAVAAINAPWVVDSTAKVAK 124

Query: 120 AVMDGAFGDMMNKKLEEQGLVNLAYWENGFRNLSNSKHAVNKWEDFSGLKVRVMQNNIFL 179
            V +     +++    E G V LA+     R + ++K      +D +G+K+R+     + 
Sbjct: 125 LVREPVAMKLLDVLPAETGTVGLAWGITTMRVVFSAKEIAGL-DDINGMKLRINTTPAYR 183

Query: 180 DTFQNLGANATPMAFGEVFSALETNAIDAQENPYVTIDTSKFYEVQKYVTETNHAYTPFL 239
           D +Q LGA  TP+    VF A+    +D  E         +F +V K + + N  + P +
Sbjct: 184 DFYQLLGAAPTPIPTPAVFDAMSNGQVDGLEADLDFSWNQRFDKVSKTMLKMNAIFMPCV 243

Query: 240 FLFSKPIFDSYTPEEQTALRECAVVGRDEERKVIRELNQKSLEKIKAAGLEVNTLSPEEQ 299
            L S  ++ +    ++  +        DE+           LEK   AG+ +  ++  + 
Sbjct: 244 ALASGRVWQTLPEADREIIARLTKSALDEQIDATVANEPALLEKFAGAGIPIKDVTVADA 303

Query: 300 TRI 302
            RI
Sbjct: 304 GRI 306