Pairwise Alignments

Query, 238 a.a., transcriptional regulator, GntR family from Agrobacterium fabrum C58

Subject, 237 a.a., Predicted D-glucarate or D-galactorate regulator, GntR family from Pseudomonas fluorescens FW300-N1B4

 Score =  108 bits (269), Expect = 1e-28
 Identities = 71/233 (30%), Positives = 124/233 (53%), Gaps = 16/233 (6%)

Query: 10  RNDHLPGRIAAEIAREINDSQLGPGDRLPTEHVLAKTFGVSRSVIREAIAQLRNEGFVET 69
           R  +L   + +++ + I   Q+ PGD+LP+E+ + +  GVSR+V+REAI++L+  G VET
Sbjct: 12  RAHNLAHDLVSKLTQSILLGQMVPGDKLPSENSIVQEHGVSRTVVREAISKLQASGLVET 71

Query: 70  RQGVGAFVTD--PRQRLSIRIEQSTLNDPENFRDLMQLRMSLEIDAAGLAALHHKPEHLE 127
           R G+G FV +  P Q L + ++ +        R +++LRM LE  AA LAA+      L 
Sbjct: 72  RHGIGTFVLERAPDQGLRLNVDTAL-----GVRSILELRMGLETQAAALAAVRRTDRQLA 126

Query: 128 KFDKAIYGMRNAIEWSKDGVEADLDFHRTMAQATGNEYFLIFLGFIAQ------RISSAI 181
           +  +A+   ++ +  +   VEAD  FH  +A+ATGN  F   +  +        R+++A 
Sbjct: 127 QMREALDDYQSLLANNDSCVEADKRFHLLIAEATGNACFTEIMQHLGSAMIPRTRVNAAE 186

Query: 182 NTAFSRAVYGEILEITINEHVVLRDAIASRNVALARDAMRQHILGAARRLNID 234
             +   +  G++  +   EH  + +AI  ++   AR AM  H+  +  R + D
Sbjct: 187 RGSADLSKLGQLANL---EHEAILNAIRRQDPDAARAAMWLHLTNSRDRFSAD 236