Pairwise Alignments

Query, 469 a.a., 3-isopropylmalate dehydratase, large subunit from Agrobacterium fabrum C58

Subject, 868 a.a., Fe/S-dependent 2-methylisocitrate dehydratase AcnD from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (254), Expect = 5e-26
 Identities = 129/491 (26%), Positives = 201/491 (40%), Gaps = 59/491 (12%)

Query: 16  VVNRDPDGTCLLYIDRHLVHEVTSPQAF---EGLRIA-----GRP--VHSPTRTLAVVDH 65
           ++ R  D     Y  R + H++    A     GLR A     G P  V+    T  +VDH
Sbjct: 65  IIERKRDLDFPWYPARVVCHDILGQTALVDLAGLRDAIAEQGGDPAQVNPVVETQLIVDH 124

Query: 66  NVPTTADRLEGIKNEESRIQVEALAQNAKEFGVEYYSERDKR-------QGIVH------ 112
           ++       +    E++R   +   ++   F +E+     K         GI+H      
Sbjct: 125 SLAVEYSGCDPDAFEKNRAVEDRRNEDRFHF-IEWCKTAFKNVSVIPAGNGIMHQINLEK 183

Query: 113 ---IVGPEQGFTLPGMTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNM 169
              ++  ++G   P  + V  DSHT    A G LA G+G  E E V+  +  + +    +
Sbjct: 184 MSPVIQVKEGVAFPD-SCVGTDSHTPHVDALGVLAIGVGGLEAETVMLGRPSMMRLPDIV 242

Query: 170 LVRVDGKLPESVTAKDIILAIIGEIGTAGGTGHVIEFAGEAIRSLSMEGRMTVCNMTIEG 229
            V++ G     +TA DI+LA+   +         +EF GE  ++L++  R T+ NMT E 
Sbjct: 243 GVKLTGARQPGITATDIVLALTEFLRRERVVSAYLEFFGEGAKALTIGDRATISNMTPEY 302

Query: 230 GARAGLIAPDETTFDYIKDKPRAPKGETLEQAIAYWKTLKSD--EGAHYDKVVILDAANL 287
           GA AG+   DE T  Y+K   R P+   L ++ A    L +D  E A Y++V+  D +++
Sbjct: 303 GATAGMFYIDEQTIQYLKLTGREPEQVALVESYAKAAGLWADSLEHAEYERVLEFDLSSV 362

Query: 288 PPIVSWGSSPEDVTSVEGIVPNPDDIEEENKRTSKWRALDYMGLKPGTRITDIAIDRVFI 347
              ++  S+P      + +      I  + +      A    GL P     D A+    I
Sbjct: 363 ERNLAGPSNPHRRLPTKDLSARGIAIPAQQR-----EAQQAEGLMP-----DGAVIIAAI 412

Query: 348 GSCTNGRIEDLRAAAKIVD------GRKVASTVSAMIVPGSGLVKEQAEKEGLDKIFLDA 401
            SCTN        AA ++       G K    V     PGS + K   ++ GL       
Sbjct: 413 TSCTNTSNPRNVVAAGLLAKKANQLGLKRQPWVKTSFAPGSKVAKLYLQEAGLLSELEQL 472

Query: 402 GFEWREPGCSMCLAMNDDRLKPG------ER-----CASTSNRNFEGR-QGYKSRTHLVS 449
           GF      C+ C  M+   L P       ER        + NRNF+GR   Y  +  L S
Sbjct: 473 GFGIVAYACTTCNGMS-GALDPAIQQEIIERDLYATAVLSGNRNFDGRIHPYAKQAFLAS 531

Query: 450 PAMAAAAAIAG 460
           P +  A AIAG
Sbjct: 532 PPLVVAYAIAG 542